Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq13 100 1e-15
seq11 91.5 6e-13
>seq13
Length=2085791
Score = 100 bits (110), Expect = 1e-15
Identities = 175/253 (69%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 12728 TTGAGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGA 12787
|| || ||||| || ||| ||| ||| || | | || || || ||||| | ||||
Sbjct 1986514 TTAAGGACATCATAGTAGATCACTCGCATTCCCATAGCTTCCGCAAGCACAGACAGCTGA 1986455
Query 12788 GAACCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCT 12847
|||| || ||||| || || || ||||| ||||| ||||| || || | ||| ||
Sbjct 1986454 CTGCCAACGTGTCCATAGCCAACAATTCCTAGCGTCTTGCCTCTGACCTCCCAGCAGCCA 1986395
Query 12848 --TGAGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGAC 12905
||||| |||||||||||||||||| ||||| || ||| |||| || |||| ||| |
Sbjct 1986394 GATGAGAC--CTTGTTCCAAATGCCTTGATGTAGCTCATTGCTTCTGTCGCCAAGCTGTC 1986337
Query 12906 GAGAAAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGG 12965
| ||| ||| | || || || || ||||| ||||| || | ||| | || |
Sbjct 1986336 TTGCCAGAGCAATGATTTCGCCAATCATTAGCTCAGCCACTGATCGCGAGTTTGAGAACG 1986277
Query 12966 GAGAATTAAAGAC 12978
|||| || || ||
Sbjct 1986276 GAGAGTTGAACAC 1986264
>seq11
Length=3629084
Score = 91.5 bits (100), Expect = 6e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| |||||||| || ||||||| | |||||||||||||||| || || || || |
Sbjct 792145 CAATTGTCATACGCGACGGAATGGCGTGAGGGTTGATGATGATATCTGGTGTGATACCAT 792086
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544
| || | || ||||| ||||| | || | ||| |||||| || || || || |||
Sbjct 792085 CTGCAGAGAACGGCATGTCTTCCTGGCGATAGGTGATACCAATCGTACCTTTCTGACCAT 792026
Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569
||||| || |||||||| |||||
Sbjct 792025 GTCGAGAGGCGAACTTGTCACCAAT 792001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884886061898502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |