Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq13 100 1e-15 seq11 91.5 6e-13 >seq13 Length=2085791 Score = 100 bits (110), Expect = 1e-15 Identities = 175/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 12728 TTGAGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGA 12787 || || ||||| || ||| ||| ||| || | | || || || ||||| | |||| Sbjct 1986514 TTAAGGACATCATAGTAGATCACTCGCATTCCCATAGCTTCCGCAAGCACAGACAGCTGA 1986455 Query 12788 GAACCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCT 12847 |||| || ||||| || || || ||||| ||||| ||||| || || | ||| || Sbjct 1986454 CTGCCAACGTGTCCATAGCCAACAATTCCTAGCGTCTTGCCTCTGACCTCCCAGCAGCCA 1986395 Query 12848 --TGAGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGAC 12905 ||||| |||||||||||||||||| ||||| || ||| |||| || |||| ||| | Sbjct 1986394 GATGAGAC--CTTGTTCCAAATGCCTTGATGTAGCTCATTGCTTCTGTCGCCAAGCTGTC 1986337 Query 12906 GAGAAAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGG 12965 | ||| ||| | || || || || ||||| ||||| || | ||| | || | Sbjct 1986336 TTGCCAGAGCAATGATTTCGCCAATCATTAGCTCAGCCACTGATCGCGAGTTTGAGAACG 1986277 Query 12966 GAGAATTAAAGAC 12978 |||| || || || Sbjct 1986276 GAGAGTTGAACAC 1986264 >seq11 Length=3629084 Score = 91.5 bits (100), Expect = 6e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| |||||||| || ||||||| | |||||||||||||||| || || || || | Sbjct 792145 CAATTGTCATACGCGACGGAATGGCGTGAGGGTTGATGATGATATCTGGTGTGATACCAT 792086 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | || | || ||||| ||||| | || | ||| |||||| || || || || ||| Sbjct 792085 CTGCAGAGAACGGCATGTCTTCCTGGCGATAGGTGATACCAATCGTACCTTTCTGACCAT 792026 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 ||||| || |||||||| ||||| Sbjct 792025 GTCGAGAGGCGAACTTGTCACCAAT 792001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884886061898502