Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq20 136 1e-29 >seq20 Length=38536 Score = 136 bits (150), Expect = 1e-29 Identities = 199/278 (72%), Gaps = 9/278 (3%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| | Sbjct 4750 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGC 4691 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| | ||||| |||||| | | | ||| | | ||||| ||||||||||||||||| Sbjct 4690 ATCGTTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 4631 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | || | || ||||||| || | ||||| || |||| | || |||| ||| Sbjct 4630 CCCTCATAGGTAAGGCCGCCATTAATCGGGGTGTCCTTCAAAACCT--CAGTTA-ATAAT 4574 Query 187 C-----CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTT 240 | ||| ||| || ||| || |||||| | |||||| | |||| | | || Sbjct 4573 CAAGGTAAATCCGTTACCCAGCCGACATTGGGCAGACATCACACTCAATACTTTGATTTT 4514 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | |||||||||||||||||||||| |||||||||| Sbjct 4513 TTATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 4476 Score = 136 bits (150), Expect = 1e-29 Identities = 199/278 (72%), Gaps = 9/278 (3%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| | Sbjct 33052 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGC 32993 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| | ||||| |||||| | | | ||| | | ||||| ||||||||||||||||| Sbjct 32992 ATCGTTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 32933 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | || | || ||||||| || | ||||| || |||| | || |||| ||| Sbjct 32932 CCCTCATAGGTAAGGCCGCCATTAATCGGGGTGTCCTTCAAAACCT--CAGTTA-ATAAT 32876 Query 187 C-----CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTT 240 | ||| ||| || ||| || |||||| | |||||| | |||| | | || Sbjct 32875 CAAGGTAAATCCGTTACCCAGCCGACATTGGGCAGACATCACACTCAATACTTTGATTTT 32816 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | |||||||||||||||||||||| |||||||||| Sbjct 32815 TTATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 32778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799218304