Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq21 300 3e-79 seq10 300 3e-79 >seq21 Length=13773 Score = 300 bits (332), Expect = 3e-79 Identities = 223/258 (86%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5562 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5621 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||| | |||||||| |||| || ||| |||||||| ||||||||||||| Sbjct 5622 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCCTAAGAAGCCAGC 5680 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | | | || |||||||||| || |||||||||||||||||| ||||| Sbjct 5681 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 5739 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 5740 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 5799 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 5800 AAGAGCTCTCAATCTGTC 5817 >seq10 Length=3304607 Score = 300 bits (332), Expect = 3e-79 Identities = 223/258 (86%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2862 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2803 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||| | |||||||| |||| || ||| |||||||| ||||||||||||| Sbjct 2802 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCCTAAGAAGCCAGC 2744 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | | | || |||||||||| || |||||||||||||||||| ||||| Sbjct 2743 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 2685 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 2684 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 2625 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 2624 AAGAGCTCTCAATCTGTC 2607 Score = 300 bits (332), Expect = 3e-79 Identities = 223/258 (86%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10807 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 10748 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||| | |||||||| |||| || ||| |||||||| ||||||||||||| Sbjct 10747 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCCTAAGAAGCCAGC 10689 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | | | || |||||||||| || |||||||||||||||||| ||||| Sbjct 10688 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 10630 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 10629 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 10570 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 10569 AAGAGCTCTCAATCTGTC 10552 Score = 300 bits (332), Expect = 3e-79 Identities = 223/258 (86%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18752 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 18693 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||| | |||||||| |||| || ||| |||||||| ||||||||||||| Sbjct 18692 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCCTAAGAAGCCAGC 18634 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | | | || |||||||||| || |||||||||||||||||| ||||| Sbjct 18633 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 18575 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 18574 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 18515 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 18514 AAGAGCTCTCAATCTGTC 18497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799521422