Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq21 87.8 1e-15 seq10 87.8 1e-15 >seq21 Length=13773 Score = 87.8 bits (96), Expect = 1e-15 Identities = 70/81 (86%), Gaps = 4/81 (5%) Strand=Plus/Plus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||| | || ||| |||||| ||||||| || ||||||||| ||||||||||| ||| Sbjct 5363 AGCCAGTCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 5418 Query 92 TACAAAGGGCAGGGACGTAAT 112 ||||||||||||||||||||| Sbjct 5419 TACAAAGGGCAGGGACGTAAT 5439 >seq10 Length=3304607 Score = 87.8 bits (96), Expect = 1e-15 Identities = 70/81 (86%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||| | || ||| |||||| ||||||| || ||||||||| ||||||||||| ||| Sbjct 3061 AGCCAGTCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 3006 Query 92 TACAAAGGGCAGGGACGTAAT 112 ||||||||||||||||||||| Sbjct 3005 TACAAAGGGCAGGGACGTAAT 2985 Score = 87.8 bits (96), Expect = 1e-15 Identities = 70/81 (86%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||| | || ||| |||||| ||||||| || ||||||||| ||||||||||| ||| Sbjct 11006 AGCCAGTCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 10951 Query 92 TACAAAGGGCAGGGACGTAAT 112 ||||||||||||||||||||| Sbjct 10950 TACAAAGGGCAGGGACGTAAT 10930 Score = 87.8 bits (96), Expect = 1e-15 Identities = 70/81 (86%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||| | || ||| |||||| ||||||| || ||||||||| ||||||||||| ||| Sbjct 18951 AGCCAGTCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 18896 Query 92 TACAAAGGGCAGGGACGTAAT 112 ||||||||||||||||||||| Sbjct 18895 TACAAAGGGCAGGGACGTAAT 18875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799825160