Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq21 178 2e-42 seq10 178 2e-42 >seq21 Length=13773 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 6205 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 6264 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 6265 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCC-CA 6323 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| | || | | |||||||||| Sbjct 6324 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 6383 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 6384 GTGAGGCGGACC 6395 >seq10 Length=3304607 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2219 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2160 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 2159 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCC-CA 2101 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| | || | | |||||||||| Sbjct 2100 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 2041 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 2040 GTGAGGCGGACC 2029 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 10164 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 10105 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 10104 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCC-CA 10046 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| | || | | |||||||||| Sbjct 10045 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 9986 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 9985 GTGAGGCGGACC 9974 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 18109 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 18050 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 18049 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCC-CA 17991 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| | || | | |||||||||| Sbjct 17990 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 17931 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 17930 GTGAGGCGGACC 17919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199642508