Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq21 277 3e-72 seq10 277 3e-72 >seq21 Length=13773 Score = 277 bits (306), Expect = 3e-72 Identities = 236/283 (83%), Gaps = 10/283 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 1764 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 1707 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 1706 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 1647 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| || |||| || |||| ||||||| ||||||||||||| |||| |||| | Sbjct 1646 GAACGCGGCGATTTCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGC 1587 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| ||||| || || | | | ||| ||||||||| Sbjct 1586 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCTCGAGAGCT-GGCTGGCGGA 1530 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||| ||||| |||| |||||| ||||| |||||||||| Sbjct 1529 TTGTAATGTCACCTCGCGCGGGGATAGATCCTCTGCAGACGAC 1487 >seq10 Length=3304607 Score = 277 bits (306), Expect = 3e-72 Identities = 236/283 (83%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 6662 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 6719 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 6720 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 6779 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| || |||| || |||| ||||||| ||||||||||||| |||| |||| | Sbjct 6780 GAACGCGGCGATTTCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGC 6839 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| ||||| || || | | | ||| ||||||||| Sbjct 6840 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCTCGAGAGCT-GGCTGGCGGA 6896 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||| ||||| |||| |||||| ||||| |||||||||| Sbjct 6897 TTGTAATGTCACCTCGCGCGGGGATAGATCCTCTGCAGACGAC 6939 Score = 277 bits (306), Expect = 3e-72 Identities = 236/283 (83%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 14609 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 14666 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 14667 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 14726 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| || |||| || |||| ||||||| ||||||||||||| |||| |||| | Sbjct 14727 GAACGCGGCGATTTCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGC 14786 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| ||||| || || | | | ||| ||||||||| Sbjct 14787 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCTCGAGAGCT-GGCTGGCGGA 14843 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||| ||||| |||| |||||| ||||| |||||||||| Sbjct 14844 TTGTAATGTCACCTCGCGCGGGGATAGATCCTCTGCAGACGAC 14886 Score = 277 bits (306), Expect = 3e-72 Identities = 236/283 (83%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 22553 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 22610 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 22611 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 22670 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| || |||| || |||| ||||||| ||||||||||||| |||| |||| | Sbjct 22671 GAACGCGGCGATTTCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGC 22730 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| ||||| || || | | | ||| ||||||||| Sbjct 22731 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCTCGAGAGCT-GGCTGGCGGA 22787 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||| ||||| |||| |||||| ||||| |||||||||| Sbjct 22788 TTGTAATGTCACCTCGCGCGGGGATAGATCCTCTGCAGACGAC 22830 Score = 87.8 bits (96), Expect = 3e-15 Identities = 58/62 (94%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 2509874 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 2509817 Query 61 GC 62 || Sbjct 2509816 GC 2509815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199507968