Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq10 318 5e-82 seq54 123 2e-23 >seq10 Length=3304607 Score = 318 bits (352), Expect = 5e-82 Identities = 643/949 (68%), Gaps = 20/949 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 |||||||||||||| || | |||||| ||||| | ||| |||||||| | ||||||| Sbjct 1364196 GGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATG 1364255 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || |||||||| || || ||| || || |||| |||| || || ||||| Sbjct 1364256 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTG 1364315 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||||| |||| | || | || |||||| |||| ||||| ||| Sbjct 1364316 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 1364375 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTA---CGT--ACCGCCCTACCTTTGCGTTCGT 66236 || | ||| || | ||||| | || || || ||||| |||| |||| Sbjct 1364376 GCATACCAGAGCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCT-CCTTC----TCGT 1364430 Query 66237 AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGT 66296 | | |||||||| ||||| ||||| | || || | |||| | || || Sbjct 1364431 ACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGT 1364490 Query 66297 GTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTA 66356 || || | || | ||| ||||| | || ||||| ||| || |||||||| Sbjct 1364491 TGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAG 1364550 Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 ||||||| |||||||||||||| || || || || || | ||||| || || || | Sbjct 1364551 TCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGA 1364610 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 ||||||||||| |||| || || ||||| || |||||||||||||| |||| || Sbjct 1364611 GATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAG 1364670 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 || ||| ||||| ||||| |||||||| || || ||||| ||||| | ||| | Sbjct 1364671 GGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAG 1364730 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 | || | || || || ||||||||| || | ||| ||| || || || || Sbjct 1364731 GAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGC 1364790 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---- 66652 ||||||||||| |||||| ||||| || ||||| || || |||||| || | Sbjct 1364791 GGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA---GGTCTTAA 1364847 Query 66653 -ACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 | |||| | | || || |||||| ||| | ||| | ||| |||| ||| Sbjct 1364848 GAGTGTC--GTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGC 1364905 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 ||| ||||| | ||| |||||||| |||||| ||||| | ||||| || ||||| | Sbjct 1364906 AAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTT 1364965 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831 | ||||| | | ||| ||||| ||| | || |||| ||||| || || |||| Sbjct 1364966 TTGGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGAC 1365025 Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAA 66891 ||| |||||||| |||| || || || ||| | | | | |||||| | | | Sbjct 1365026 AGCAACGCGCATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAG 1365085 Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || || || ||||||||||||| ||| ||| | ||| ||||| ||| Sbjct 1365086 ATATGAACGCTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCG 1365134 Score = 127 bits (140), Expect = 2e-24 Identities = 319/476 (67%), Gaps = 14/476 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | | || || ||| |||| | | ||||||||||||||| Sbjct 1363290 TCGACGGTGAACTGGATAGGAGCAGAGGCGGCCATGGTGCGCAAGTAGTACATGCCGGTC 1363349 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 || || || ||| | ||| ||||| || | | || |||| | | ||||| Sbjct 1363350 TTCAGACCCATCTTCCAGCCGGCGAAGTGCATGGAGG-TGATCTTGCCCATGGTGGGCTC 1363408 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || |||| ||||| ||| |||||||| ||| || || || ||||| Sbjct 1363409 CTTCAGGTGGATGTTCAGGGACTGGGACTGGTCGATGTAGGCACCGCGGTCGGCGGCCAT 1363468 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | | ||| ||| || || ||||||||||||||||| ||| | | | | || Sbjct 1363469 CTGCAGGATGTTACGCTGGGAGATTTCCCAGACGGTCTTGTAGAGG-GCCTTGATGTCGG 1363527 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374 ||||| | |||| |||||| || || | | || || || || || || ||| Sbjct 1363528 CGGGAATGTTGGGGATGTTCTGGACGGAGCCGCCGTCG-GCGATGATACGGTTCTTCATG 1363586 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430 || ||||||||||| | |||| ||| | | || ||| | | |||| ||| Sbjct 1363587 TTGTCGGACCACAAACCGAGGTCGACAAGGTCCTTCAGGAGCCAGGGG----TTGACGAC 1363642 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||||| |||| ||| ||||| ||| |||||||| || ||| ||| || ||| | Sbjct 1363643 CTGGAACTCACCGGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCA 1363702 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 || || ||| || || || ||||| ||||| |||||||||||||||| || Sbjct 1363703 CTCGTTGAAGCCGAGGATCTGACTGGTAGAGGCAGTGGGCATGGGAGCGACCAGCA 1363758 >seq54 Length=3157102 Score = 123 bits (136), Expect = 2e-23 Identities = 209/297 (70%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| | Sbjct 1794522 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATTGATCTA 1794463 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | || | | ||| | ||| | | ||||| Sbjct 1794462 TCCAAGGATCTCCACGACTGGCACAACCGCCTCAACGAT-GATGAGCGTTACTTCATCTC 1794404 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || || |||||||||||||| || || | | || || Sbjct 1794403 CCACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAAAACCTGGTCGAGCG 1794344 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| ||| | ||||| || | | ||||| ||||| |||||||| |||||||| | Sbjct 1794343 TTTCAGCGGA-GAGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 1794285 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| ||||||| |||| ||| | | ||||| ||||| || |||| ||||| Sbjct 1794284 TGGAGAACATCCACTCCGAGACCTACTCTCTACTCATTGATACTTATATCAAGGAGC 1794228 Score = 122 bits (134), Expect = 7e-23 Identities = 285/425 (67%), Gaps = 9/425 (2%) Strand=Plus/Minus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||| | || ||| ||| || || ||| | ||||| ||| | ||||| ||||| Sbjct 1794043 GTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGT 1793984 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||||||||| |||||| ||| || | || || || |||||||| | || | Sbjct 1793983 CTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCGTGACGAGGGTCTCCACACT 1793924 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTG 61687 ||||| ||| | | || ||| | | ||| | || || || | || | Sbjct 1793923 GATTTCGCTTGTCTCCTCTTCTCTC---ACCTGAACCACCGCCCTGATCCCA--AGGTCG 1793869 Query 61688 TGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCT-TTG 61746 | | || || || ||||| || |||||| ||||| || || ||||||||| || Sbjct 1793868 TTGAAGACATCATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTC 1793809 Query 61747 CCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCC 61806 || || | || | |||||||| || |||| ||||| || || ||||| || Sbjct 1793808 CCTGTGGC-CTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCT 1793750 Query 61807 GACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866 |||||||| | || | | || | ||| | ||| || | ||||| || || Sbjct 1793749 GACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTACTACAACTCTGCCAACCCCTTCGAC 1793690 Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926 |||||||| || || |||| ||||||||| || || |||||||| ||||| || ||| Sbjct 1793689 TTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGAC 1793630 Query 61927 TATCA 61931 ||||| Sbjct 1793629 TATCA 1793625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567699587680