Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq745 154 8e-36
seq924 131 9e-29
>seq745
Length=8775
Score = 154 bits (170), Expect = 8e-36
Identities = 105/117 (90%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||| || |||| || | || || ||
Sbjct 5856 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATCAT-AGAATCCCGTCC 5914
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5915 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5971
>seq924
Length=862
Score = 131 bits (144), Expect = 9e-29
Identities = 92/104 (88%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 14 TTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGG 73
|||| ||||||||||||||||| || |||| || | || || |||||||||||||||
Sbjct 862 TTGAGTTCTCGTAAGGTGCCGAACGGGTCATCAT-AGAATCCCGTCCGATCCCTAGTCGG 804
Query 74 CATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 803 CATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278397452640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |