Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1016 271 6e-68 seq940 136 3e-27 >seq1016 Length=40071 Score = 271 bits (300), Expect = 6e-68 Identities = 632/944 (67%), Gaps = 8/944 (1%) Strand=Plus/Minus Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059 |||| ||||| || || || |||||||||||||| | ||| ||||| || | ||||||| Sbjct 23087 TGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGA 23028 Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 |||| || |||||||| || || ||| || || |||| |||| || |||||||| Sbjct 23027 CAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCT 22968 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 ||||| ||||||||||| | |||| | || | || |||||| || | ||| | | Sbjct 22967 TGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAA 22908 Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAA 66238 |||||| ||| || | ||||| | || | | | ||| | || | | ||||| Sbjct 22907 TGGCGTACCAGAGCTTCTGAGCCTTGATAGT-CTTGCGGCCACGGCCCTCCTGCTCGTAC 22849 Query 66239 TGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGT 66298 | ||||||| ||||| ||||| | || || | ||| | || || || Sbjct 22848 TTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTG 22789 Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 ||||| | || | ||| ||||| | || || || ||| || ||||| || || Sbjct 22788 GGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTC 22729 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || | ||||||||||| || || || || |||||| | ||||| || || |||| Sbjct 22728 CACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGA 22669 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || |||||||| |||| ||||| ||||| || |||||||||||||| || | ||| Sbjct 22668 TCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGCGCCAGGG 22609 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || ||| ||||| ||||| || ||||| ||| ||||| || ||||||| ||| || Sbjct 22608 CGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACGCAGCATAGGA 22549 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 || | ||||| || ||| ||||| || | ||| || || || || || | Sbjct 22548 ACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAGCGCGAATGCGG 22489 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTG 66656 || || |||||||| ||||| || || ||||| ||||| ||||| || | | || Sbjct 22488 TGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTG 22429 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716 || | || || |||||| ||| | | | | | ||| |||| || ||| | Sbjct 22428 TC--ATAGATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCAAGCT 22371 Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776 |||| | ||| || ||||| ||| | ||||| | ||||| || ||||| | | | Sbjct 22370 GGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAAGTACTTCTGGG 22311 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCAC 66836 |||| | | ||| ||||| ||| | ||||||| ||||| ||||| |||| ||| Sbjct 22310 ACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACGGCAA 22251 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAG 66895 ||||| || | || ||||| || || | || | || || || | | | ||| Sbjct 22250 CACGCATGAGCAAGTGCTGAGGACGCTC-AGCAACATTGCCGTTAATCCGAAGAAGGTAT 22192 Query 66896 GAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || || || |||||||||| || ||| | ||| ||||| || Sbjct 22191 GAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTC 22148 >seq940 Length=59259 Score = 136 bits (150), Expect = 3e-27 Identities = 212/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | |||||| | ||| | Sbjct 49308 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATCTC 49367 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | || | | ||| || ||| | | |||||| Sbjct 49368 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGA-CGATGAGCGTTACTTCATTTC 49426 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || |||| ||||| ||||| || |||||||| ||||| ||||| | | || || Sbjct 49427 CCACGTCCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTCGAGCG 49486 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| | | || |||| || | | ||||| ||||| ||||||||||||||||| | Sbjct 49487 TTTCAGTGGAG-AGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGA 49545 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| ||||||| |||| ||| | |||||||| || || || | ||||| Sbjct 49546 TGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTATATTAAGGAGC 49602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562035361840