Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1144 140 5e-31 seq223 120 5e-25 >seq1144 Length=11869 Score = 140 bits (154), Expect = 5e-31 Identities = 164/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||| ||||||||| | | ||||| |||||||| || ||||||| ||| | Sbjct 4115 GTATAAAGGGTAGGGACGTAATTAGTATGAGCTA-ATGACTCGTGCCTACTAGGTATT-C 4172 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 || ||| |||| || ||||| |||| |||||||| | ||||| ||| | |||||| Sbjct 4173 CTTGTTAAAGAGTAATAATTGTAATGCTCTATCCCTAGTACGATAGGGTTTAATAAGATT 4232 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| |||| | || ||||||||| ||| || || ||| ||||||||||| Sbjct 4233 ACCTAAACCTCTTGGTTAAGGTGATATACTTACTGGCCCTATTAGTATAGCGCGCGTGTA 4292 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| |||| ||||||||| ||||||||||| ||||||| Sbjct 4293 GCCTAGAATATCTAAGGGTATCACAGACCTATTATTGC 4330 >seq223 Length=298 Score = 120 bits (132), Expect = 5e-25 Identities = 90/103 (87%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | |||||| ||||||||| || ||||||| ||| | Sbjct 106 GTACAAAGGGCAGGGACGTAATCGGCACGAGCT-GATGACTCGTGCCTACTAGGCATT-C 49 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 ||||||||||| ||| |||||||||| |||||||||| ||||| Sbjct 48 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751991359990