Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq352 477 2e-132 seq1144 352 5e-95 seq620 136 7e-30 >seq352 Length=717 Score = 477 bits (528), Expect = 2e-132 Identities = 295/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 594 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTGG-GGGGA 536 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 476 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 475 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 416 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 415 AATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 356 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| || Sbjct 355 ATTTGCTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGGGA 296 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 295 ACGAAAGTTAGGGG 282 >seq1144 Length=11869 Score = 352 bits (390), Expect = 5e-95 Identities = 266/312 (85%), Gaps = 1/312 (0%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66 ||||||| | ||||||||||| |||| || ||| |||||||| | | | ||||| | Sbjct 5069 GTCCGGCTAGACCTTTCCTTCTAGGGAACCTTATGGCCTTCACTAGCTATAG-GGGGAAC 5011 Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 |||||||||||| ||||||||||||||| || |||| | |||||| |||||||| |||| Sbjct 5010 TAGGACTTTTACTATGAAAAAATTAGAGTATTTAAAGTAAGCCTTTACTCGAATATATTA 4951 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||| ||||||||||||||||||| ||||||||||| || |||||||||||||| ||| Sbjct 4950 GCATAGAATAATAGAATAGGACGTATGGTTCTATTTTATTAGTTTCTAGGACCGCTATAA 4891 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 | ||||||||||||||| |||| || |||||| | | ||||||||||||||||||||| Sbjct 4890 TAATTAATAGGGATAGTTAGGGGCGTTAGTATTTAGCTATCAGAGGTGAAATTCTTGGAT 4831 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||| | ||||||||||||| | ||||| |||||||||||||||||||||||| || |||| Sbjct 4830 TTACTAAAGACTAACTACTACAAAAGCATTCACCAAGGATGTTTTCATTAATTAGGGAAC 4771 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 4770 GAAAGTTAGGGG 4759 >seq620 Length=116466 Score = 136 bits (150), Expect = 7e-30 Identities = 108/127 (85%), Gaps = 6/127 (5%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCC-TTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63 |||||| || || |||||| |||| |||| || |||| |||| || ||| |||| Sbjct 3309 TGGTCCAGCTGGATCTTTCCCTTCTTGGGAACCTCATGGCCTT----GGCTGTAA-GGGG 3255 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 3254 AGCCAGGACTTTTACTGTGAAAAAATTGGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 3195 Query 124 TTAGCAT 130 ||||||| Sbjct 3194 TTAGCAT 3188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915189145728