Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1144 553 7e-155 seq70 347 5e-93 seq180 338 3e-90 seq600 86.0 3e-14 >seq1144 Length=11869 Score = 553 bits (612), Expect = 7e-155 Identities = 518/655 (79%), Gaps = 3/655 (0%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 |||||||||||| ||||||||| ||||||||| |||||||||| || |||||||||| Sbjct 3197 AAGCTCCTTCGATAAGTCGAGTTATTTGGGAATATAGCTCTAAATAGGTGGTAAATTTCA 3138 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||||||||| ||| ||||| |||||||| ||||||||| |||||||||| || Sbjct 3137 TCTAAAGCTAAATATTAGCCGGAGACTAATAGCGCATAAGTAGAGTAATCGAAAGATAAA 3078 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| | | Sbjct 3077 AAGCACTTTAAAAAGAGAGTTAAAAAGCACGTAAAATTGTTAAAAGGGAAGCGCTTACGA 3018 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTGCGGTCAG 265 ||||||| | | || | | | | | ||| |||||| | | | | || || Sbjct 3017 CCAGACTCACTCATAGG-GTTTAGCTAGTAT-TCGTGCCGGTATATTTCCCCGTGGGTAG 2960 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 || ||| || | | || || | ||||||||| ||| || | ||| | |||| || Sbjct 2959 GCTAGCGTCGGTTTAGGTAGTTAGTTAAAGGCCCTCAGAAGGTAACGCCCCTAGGGGCGT 2900 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| |||| ||| || || ||| ||| |||| |||||| ||||| || Sbjct 2899 CTTATAGCCAAGGGTATAATACGACCTACCTAGACCGAGGAACGCGCTTCGGCTCAGACA 2840 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 || || |||| || |||||| ||| |||| |||| ||| ||||||||||| ||||| Sbjct 2839 CTAGCATAATAGTCATAAGCGACCCATCTTAAAACATAGACTAAGGAGTCTAATATCTAC 2780 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||| || |||| | ||||||||||||| ||| |||| ||||||||| ||||||| | Sbjct 2779 GCGAGTATTCGGGTATTAAACCCGTGCGCGAAATAAAAGCAAACGGAGGTAGGAACCCTT 2720 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||| || ||||||||||||| | |||||| ||| ||||| ||||||||| ||||| Sbjct 2719 ACGGGTATACTATCGACCGATCCTAAAGTCTTCAGATAGATTTAAGTAAGAGCGTAGCTA 2660 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 || ||||| |||||| ||||||||| ||| ||||||| |||||||||||||||||| || Sbjct 2659 TTAGGACCTAAAAGATAGTGAACTATACCTAAATAGGGCGAAGCCAGAGGAAACTCTAGT 2600 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||||||||| |||||||||| | | ||||||||||||| ||||| |||||||||| Sbjct 2599 GGAGGCTCGTAGCGGTTCTGACATACAAATCGATCGTCGAATTTAGGTATAGGGG 2545 >seq70 Length=222 Score = 347 bits (384), Expect = 5e-93 Identities = 210/222 (95%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 222 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTACGCGAGTGTTCGGGTGTCAAACC 163 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 |||||||| | |||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct 162 CGTGCGCGAAGTGAAAGCGAACGGAGGTGGGAACCCTTACGGGTGCACCATCGACCGATC 103 Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 102 CTGAAGTCTTCGGATGGATTTGAGTAAGAGCGTAGCTGTTGGGACCCGAAAGATGGTGAA 43 Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||||||| ||||||||||||||||||||||||| Sbjct 42 CTATGCCTGAATAGGGCGAAGCCAGAGGAAACTCTGGTGGAG 1 >seq180 Length=264 Score = 338 bits (374), Expect = 3e-90 Identities = 231/256 (90%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 256 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 197 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 196 AATTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 137 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 136 AGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 77 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 ||||| |||||||| || ||| | | ||| |||| | ||| ||||||| | | | | Sbjct 76 CTTGCGACCAGACTCGCTCGC-GGGGTTCAGCCGG-CATTCGTGCCGGTGTATTTCCCCG 19 Query 259 CGGTCAGGCCAGCATC 274 ||| | ||||||| || Sbjct 18 CGGGCGGGCCAGCGTC 3 >seq600 Length=572387 Score = 86.0 bits (94), Expect = 3e-14 Identities = 89/117 (76%), Gaps = 5/117 (4%) Strand=Plus/Plus Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA-----CCCGTGAGGGTGCACC 516 || |||||||| || | ||| | |||| |||||||||| ||| | ||||||||| Sbjct 358908 CAGACCCGTGCACGAAGAGAAGGCGAACAGAGGTGGGAAGGGGACCCTTATGGGTGCACC 358967 Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573 ||||||| | || || | ||||||||| ||| ||||| || ||| |||||||||| Sbjct 358968 ATCGACCAAACCCGAAGACTTCGGATGAATTCGAGTAGAGGCGTAGATGTTGGGACC 359024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079974560300