Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 553 7e-155
seq70 347 5e-93
seq180 338 3e-90
seq600 86.0 3e-14
>seq1144
Length=11869
Score = 553 bits (612), Expect = 7e-155
Identities = 518/655 (79%), Gaps = 3/655 (0%)
Strand=Plus/Minus
Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86
|||||||||||| ||||||||| ||||||||| |||||||||| || ||||||||||
Sbjct 3197 AAGCTCCTTCGATAAGTCGAGTTATTTGGGAATATAGCTCTAAATAGGTGGTAAATTTCA 3138
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||||||||||||||| ||| ||||| |||||||| ||||||||| |||||||||| ||
Sbjct 3137 TCTAAAGCTAAATATTAGCCGGAGACTAATAGCGCATAAGTAGAGTAATCGAAAGATAAA 3078
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| | |
Sbjct 3077 AAGCACTTTAAAAAGAGAGTTAAAAAGCACGTAAAATTGTTAAAAGGGAAGCGCTTACGA 3018
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTGCGGTCAG 265
||||||| | | || | | | | | ||| |||||| | | | | || ||
Sbjct 3017 CCAGACTCACTCATAGG-GTTTAGCTAGTAT-TCGTGCCGGTATATTTCCCCGTGGGTAG 2960
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
|| ||| || | | || || | ||||||||| ||| || | ||| | |||| ||
Sbjct 2959 GCTAGCGTCGGTTTAGGTAGTTAGTTAAAGGCCCTCAGAAGGTAACGCCCCTAGGGGCGT 2900
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
|||||||| |||| ||| || || ||| ||| |||| |||||| ||||| ||
Sbjct 2899 CTTATAGCCAAGGGTATAATACGACCTACCTAGACCGAGGAACGCGCTTCGGCTCAGACA 2840
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
|| || |||| || |||||| ||| |||| |||| ||| ||||||||||| |||||
Sbjct 2839 CTAGCATAATAGTCATAAGCGACCCATCTTAAAACATAGACTAAGGAGTCTAATATCTAC 2780
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
|||||| || |||| | ||||||||||||| ||| |||| ||||||||| ||||||| |
Sbjct 2779 GCGAGTATTCGGGTATTAAACCCGTGCGCGAAATAAAAGCAAACGGAGGTAGGAACCCTT 2720
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|||| || ||||||||||||| | |||||| ||| ||||| ||||||||| |||||
Sbjct 2719 ACGGGTATACTATCGACCGATCCTAAAGTCTTCAGATAGATTTAAGTAAGAGCGTAGCTA 2660
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| ||||| |||||| ||||||||| ||| ||||||| |||||||||||||||||| ||
Sbjct 2659 TTAGGACCTAAAAGATAGTGAACTATACCTAAATAGGGCGAAGCCAGAGGAAACTCTAGT 2600
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||| |||||||||| | | ||||||||||||| ||||| ||||||||||
Sbjct 2599 GGAGGCTCGTAGCGGTTCTGACATACAAATCGATCGTCGAATTTAGGTATAGGGG 2545
>seq70
Length=222
Score = 347 bits (384), Expect = 5e-93
Identities = 210/222 (95%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 222 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTACGCGAGTGTTCGGGTGTCAAACC 163
Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527
|||||||| | |||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct 162 CGTGCGCGAAGTGAAAGCGAACGGAGGTGGGAACCCTTACGGGTGCACCATCGACCGATC 103
Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 102 CTGAAGTCTTCGGATGGATTTGAGTAAGAGCGTAGCTGTTGGGACCCGAAAGATGGTGAA 43
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
|||||||||||||||| |||||||||||||||||||||||||
Sbjct 42 CTATGCCTGAATAGGGCGAAGCCAGAGGAAACTCTGGTGGAG 1
>seq180
Length=264
Score = 338 bits (374), Expect = 3e-90
Identities = 231/256 (90%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 256 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 197
Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 196 AATTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 137
Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 AGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 77
Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258
||||| |||||||| || ||| | | ||| |||| | ||| ||||||| | | | |
Sbjct 76 CTTGCGACCAGACTCGCTCGC-GGGGTTCAGCCGG-CATTCGTGCCGGTGTATTTCCCCG 19
Query 259 CGGTCAGGCCAGCATC 274
||| | ||||||| ||
Sbjct 18 CGGGCGGGCCAGCGTC 3
>seq600
Length=572387
Score = 86.0 bits (94), Expect = 3e-14
Identities = 89/117 (76%), Gaps = 5/117 (4%)
Strand=Plus/Plus
Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA-----CCCGTGAGGGTGCACC 516
|| |||||||| || | ||| | |||| |||||||||| ||| | |||||||||
Sbjct 358908 CAGACCCGTGCACGAAGAGAAGGCGAACAGAGGTGGGAAGGGGACCCTTATGGGTGCACC 358967
Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573
||||||| | || || | ||||||||| ||| ||||| || ||| ||||||||||
Sbjct 358968 ATCGACCAAACCCGAAGACTTCGGATGAATTCGAGTAGAGGCGTAGATGTTGGGACC 359024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079974560300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |