Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq223 93.3 3e-17
seq1144 71.6 8e-11
>seq223
Length=298
Score = 93.3 bits (102), Expect = 3e-17
Identities = 72/82 (88%), Gaps = 4/82 (5%)
Strand=Plus/Minus
Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90
|||||||| || ||| |||||| ||||||| || ||||||||| ||||||||||| ||
Sbjct 162 AAGCCAATCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGT 107
Query 91 GTACAAAGGGCAGGGACGTAAT 112
||||||||||||||||||||||
Sbjct 106 GTACAAAGGGCAGGGACGTAAT 85
>seq1144
Length=11869
Score = 71.6 bits (78), Expect = 8e-11
Identities = 67/82 (82%), Gaps = 4/82 (5%)
Strand=Plus/Plus
Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90
|||||||| | ||| || ||||||| |||| || |||||||| |||| |||||| ||
Sbjct 4059 AAGCCAATCCT--AAGGCCTTACTAAGCTATTTAAT-CGGTAGTA-GCGATGGGCGGTGT 4114
Query 91 GTACAAAGGGCAGGGACGTAAT 112
||| |||||| |||||||||||
Sbjct 4115 GTATAAAGGGTAGGGACGTAAT 4136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300796655480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |