Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq223 93.3 3e-17 seq1144 71.6 8e-11 >seq223 Length=298 Score = 93.3 bits (102), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 4/82 (5%) Strand=Plus/Minus Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90 |||||||| || ||| |||||| ||||||| || ||||||||| ||||||||||| || Sbjct 162 AAGCCAATCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGT 107 Query 91 GTACAAAGGGCAGGGACGTAAT 112 |||||||||||||||||||||| Sbjct 106 GTACAAAGGGCAGGGACGTAAT 85 >seq1144 Length=11869 Score = 71.6 bits (78), Expect = 8e-11 Identities = 67/82 (82%), Gaps = 4/82 (5%) Strand=Plus/Plus Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90 |||||||| | ||| || ||||||| |||| || |||||||| |||| |||||| || Sbjct 4059 AAGCCAATCCT--AAGGCCTTACTAAGCTATTTAAT-CGGTAGTA-GCGATGGGCGGTGT 4114 Query 91 GTACAAAGGGCAGGGACGTAAT 112 ||| |||||| ||||||||||| Sbjct 4115 GTATAAAGGGTAGGGACGTAAT 4136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300796655480