Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq352 174 2e-41
seq1144 107 2e-21
seq620 84.2 3e-14
>seq352
Length=717
Score = 174 bits (192), Expect = 2e-41
Identities = 156/192 (81%), Gaps = 3/192 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 425 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 484
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| || ||
Sbjct 485 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCC-CA 543
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| || || ||| ||| | || | | ||||||||||
Sbjct 544 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 603
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 604 GTGAGGCGGACC 615
>seq1144
Length=11869
Score = 107 bits (118), Expect = 2e-21
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| | ||||||||||||||||||| |||||||| ||||||
Sbjct 4902 CTAGAAACTAATAAAATAGAACCATACGTCCTATTCTATTATTCTATGCTAATATATTCG 4961
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCC 122
| | || | |||| || ||||||||||| ||| ||||||||||| ||||| ||
Sbjct 4962 AGTAAAGGCTTACTTTAAATACTCTAATTTTTTCATAGTAAAAGTCCTAGTTCCCCC 5018
>seq620
Length=116466
Score = 84.2 bits (92), Expect = 3e-14
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 51 ATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
||||||||||||||| || | ||||||||||||||||| |||||| ||| ||||||||
Sbjct 3188 ATGCTAATGTATTCGAGCAAAGGCCTGCTTTGAACACTCCAATTTTTTCACAGTAAAAGT 3247
Query 111 CCTGGTTCC 119
||||| |||
Sbjct 3248 CCTGGCTCC 3256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595193161524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |