Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq352 282 4e-74
seq1144 197 1e-48
seq620 102 8e-20
>seq352
Length=717
Score = 282 bits (312), Expect = 4e-74
Identities = 176/188 (94%), Gaps = 1/188 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 538 GGAACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 479
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 478 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 420
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 419 CCGTAATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTC 360
Query 181 TTGGATTT 188
||||||||
Sbjct 359 TTGGATTT 352
>seq1144
Length=11869
Score = 197 bits (218), Expect = 1e-48
Identities = 158/189 (84%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||| |||||||||||| |||||||||||||| || |||| | |||||| ||||||||
Sbjct 5015 GGAACTAGGACTTTTACTATGAAAAAATTAGAGTATTTAAAGTAAGCCTTTACTCGAATA 4956
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||| ||||||||||||||||||| ||||||||||| | |||||||||||||
Sbjct 4955 TATTAGCATAGAATAATAGAATAGGACGTATGGTTCTATTTTATTAGTTTCTAGGACCG- 4897
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| |||| || |||| ||||||| |||| || |||||| | | ||| |||||||||||
Sbjct 4896 CTATAATAATTAATAGGGATAGTTAGGGGCGTTAGTATTTAGCTATCAGAGGTGAAATTC 4837
Query 181 TTGGATTTA 189
|||||||||
Sbjct 4836 TTGGATTTA 4828
>seq620
Length=116466
Score = 102 bits (112), Expect = 8e-20
Identities = 64/69 (93%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||
Sbjct 3256 GGAGCCAGGACTTTTACTGTGAAAAAATTGGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 3197
Query 61 CATTACCAT 69
||||| |||
Sbjct 3196 CATTAGCAT 3188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511994117440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |