Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq352 282 4e-74 seq1144 197 1e-48 seq620 102 8e-20 >seq352 Length=717 Score = 282 bits (312), Expect = 4e-74 Identities = 176/188 (94%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 538 GGAACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 479 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 478 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 420 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 419 CCGTAATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTC 360 Query 181 TTGGATTT 188 |||||||| Sbjct 359 TTGGATTT 352 >seq1144 Length=11869 Score = 197 bits (218), Expect = 1e-48 Identities = 158/189 (84%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||| |||||||||||| |||||||||||||| || |||| | |||||| |||||||| Sbjct 5015 GGAACTAGGACTTTTACTATGAAAAAATTAGAGTATTTAAAGTAAGCCTTTACTCGAATA 4956 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| ||| ||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct 4955 TATTAGCATAGAATAATAGAATAGGACGTATGGTTCTATTTTATTAGTTTCTAGGACCG- 4897 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| ||||||| |||| || |||||| | | ||| ||||||||||| Sbjct 4896 CTATAATAATTAATAGGGATAGTTAGGGGCGTTAGTATTTAGCTATCAGAGGTGAAATTC 4837 Query 181 TTGGATTTA 189 ||||||||| Sbjct 4836 TTGGATTTA 4828 >seq620 Length=116466 Score = 102 bits (112), Expect = 8e-20 Identities = 64/69 (93%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| Sbjct 3256 GGAGCCAGGACTTTTACTGTGAAAAAATTGGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 3197 Query 61 CATTACCAT 69 ||||| ||| Sbjct 3196 CATTAGCAT 3188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511994117440