Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1144 244 2e-62 seq223 154 3e-35 >seq1144 Length=11869 Score = 244 bits (270), Expect = 2e-62 Identities = 228/290 (79%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98 ||||||||| || |||| || || ||| |||||||| ||||||||||||| |||| Sbjct 4405 TAAATAGCCCGGTCCGCATTTATAGGCCGCTAGCTTCTTAAGGGGACTATCGGCTTAAGC 4346 Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158 |||| ||||| | ||||||| ||||||||||| ||||||||| |||| ||| ||||| Sbjct 4345 CGATAGAAGTACGCAGCAATAATAGGTCTGTGATACCCTTAGATATTCTAGGCTACACGC 4286 Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218 |||||| ||| | || |||| ||| |||||||| || |||| | ||||||||| Sbjct 4285 GCGCTATACTAATAGGGCCAGTAAGTATATCACCTTAACCAAGAGGTTTAGGTAATCTTA 4226 Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278 |||||| || |||| || ||||||||||||| |||||||| ||||| ||| |||||| || Sbjct 4225 TTAAACCCTATCGTACTAGGGATAGAGCATTACAATTATTACTCTTTAACAAGGAATACC 4166 Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| || || ||||| ||| | | ||||||||||| |||||| || Sbjct 4165 TAGTAGGCACGAGTCATTAGCTCATACTAATTACGTCCCTACCCTTTATA 4116 >seq223 Length=298 Score = 154 bits (170), Expect = 3e-35 Identities = 96/103 (93%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAGG 62 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || ||||||||| || | |||||||||||||||||||||| Sbjct 63 CACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947188766208