Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq351 874 0.0 seq294 89.7 2e-15 >seq351 Length=3264 Score = 874 bits (968), Expect = 0.0 Identities = 595/665 (89%), Gaps = 3/665 (0%) Strand=Plus/Plus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 319 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 378 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 379 AATTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 438 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 439 AGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 498 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 ||||| |||||||| || ||| | | ||| ||||| ||| ||||||| | | | | Sbjct 499 CTTGCGACCAGACTCGCTCGCGGG-GTTCAGCCGGCAT-TCGTGCCGGTGTATTTCCCCG 556 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 ||| | ||||||| || | | |||||||||| |||||||| |||| || | ||| | Sbjct 557 CGGGCGGGCCAGCGTCGGTTTGGGCGGTCGGTCAAAGGCCCTCGGAAGGTAACGCCCCTA 616 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| || |||||||| ||||| |||||| || |||| ||| |||| |||||| |||| Sbjct 617 GGGGCGTCTTATAGCCGAGGGTGCAATGCGACCTGCCTAGACCGAGGAACGCGCTTCGGC 676 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 | ||| |||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct 677 TCGGACGCTGGCATAATGGTCGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 736 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||| ||||||||| |||||||||||||||||||| | |||||| ||||||||||||| Sbjct 737 CATCTACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGAAGTGAAAGCGAACGGAGGTGGG 796 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 797 AACCCTTACGGGTGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAAGAGC 856 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 857 GTAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 916 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct 917 CTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGG 976 Query 679 GGCGA 683 ||||| Sbjct 977 GGCGA 981 >seq294 Length=501725 Score = 89.7 bits (98), Expect = 2e-15 Identities = 90/117 (77%), Gaps = 5/117 (4%) Strand=Plus/Minus Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA-----CCCGTGAGGGTGCACC 516 |||||||||| ||| | ||| | |||| |||||||||| ||| | ||||||||| Sbjct 88196 CAAACCCGTGGGCGAAGAGAAGGCGAACAGAGGTGGGAAGGGGACCCTTACGGGTGCACC 88137 Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573 ||||||| | || || | ||||||||| ||| ||||| | || ||| | |||||||| Sbjct 88136 ATCGACCAAACCCGAAGACTTCGGATGAATTCGAGTAGGGGCGTAGATATTGGGACC 88080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079992320900