Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq197 277 3e-72
seq93 109 9e-22
>seq197
Length=8402
Score = 277 bits (306), Expect = 3e-72
Identities = 236/283 (83%), Gaps = 10/283 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 513 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 456
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 455 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 396
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178
||||| || |||| || |||| ||||||| ||||||||||||| |||| |||| |
Sbjct 395 GAACGCGGCGATTTCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGC 336
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235
|||| ||||||| ||| |||| ||||| || || | ||| ||| ||| |||||
Sbjct 335 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCTCGGGAGCT-GGCTAGCGGA 279
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||| ||| ||||| |||| |||||| ||||| ||||||||||
Sbjct 278 TTGTAATGTCACCTCGCGCGGGGATAGATCCTCTGCAGACGAC 236
>seq93
Length=88439
Score = 109 bits (120), Expect = 9e-22
Identities = 75/82 (91%), Gaps = 2/82 (2%)
Strand=Plus/Plus
Query 4 CGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCC 63
||| |||||||| || |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 7971 CGATAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCC 8028
Query 64 GCGAAGCTACCATCTGCTGGAT 85
|||| |||||||||||| ||||
Sbjct 8029 GCGACGCTACCATCTGCCGGAT 8050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819196603392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |