Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq197 839 0.0
seq52 181 3e-43
>seq197
Length=8402
Score = 839 bits (930), Expect = 0.0
Identities = 490/505 (97%), Gaps = 1/505 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 5286 GTTCTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 5345
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5346 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5405
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5406 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 5465
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5466 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 5525
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 5526 CAAGGCCATGCGATTCGTTAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCGTTGGT 5585
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5586 TTTTTATCTAATAAATACACCCCTTCCTGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 5645
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5646 GAATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 5705
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
|||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||
Sbjct 5706 AGCCATTCGCAGTTTCACAGTACAAGTTGCTTATACTTAGACATGCATGGCTTAATCTTT 5765
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||
Sbjct 5766 GAGACAAGCATATGACTACTGGCAG 5790
>seq52
Length=183066
Score = 181 bits (200), Expect = 3e-43
Identities = 149/181 (82%), Gaps = 9/181 (5%)
Strand=Plus/Minus
Query 107 ATGTGGTAGC--CGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164
|||| || || |||||||| |||||||| |||||||| ||||| || ||| |
Sbjct 135165 ATGTAGTTGCAGCGTTTCTCGGGCTCCCTGTCCGGAAT-------TAATTTCCAGTTGCT 135113
Query 165 CGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAA 224
||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 135112 CGTTGCCACCATGGTAAGCCACCATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAA 135053
Query 225 TGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC 284
||||| || |||||| ||||||||| | ||||| |||||| ||||| || || ||||||
Sbjct 135052 TGAACTATGGCCGGCACAAGGCCATCCAATTCGCTAAGTTGATATGATTCCCCGAGGAGC 134993
Query 285 C 285
|
Sbjct 134992 C 134992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510393535488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |