Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 212 3e-52
seq4 150 7e-34
seq3 113 2e-22
>seq1
Length=8587311
Score = 212 bits (234), Expect = 3e-52
Identities = 163/191 (85%), Gaps = 3/191 (2%)
Strand=Plus/Minus
Query 10 GGTGGCCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTA 68
|||| || ||| ||||||| ||||||||||||||| ||||||||||||||| |||||||
Sbjct 4832054 GGTGTCCGCGCCTGTGTGAAACTCCTTCGACGAGTCAAGTTGTTTGGGAATGTAGCTCTA 4831995
Query 69 AATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTA 128
|||||| || | ||||| || ||||| |||||||||| ||| ||||| |||||||||
Sbjct 4831994 AATGGGCGGGACATTTCATCCGAAGCTCAATATTGGCCGAGGACTGATAGTGCACAAGTA 4831935
Query 129 GAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTG 188
|||| || || |||| |||||||||||| ||||||||||| |||| ||||| |||||||
Sbjct 4831934 GAGTAATTGATAGATAAAAAGCACTTTGAAAAGAGAGTTAGAAAG--CGTGATATTGTTG 4831877
Query 189 AAAGGGAAGCG 199
|||||||||||
Sbjct 4831876 AAAGGGAAGCG 4831866
>seq4
Length=4347949
Score = 150 bits (166), Expect = 7e-34
Identities = 356/518 (69%), Gaps = 51/518 (10%)
Strand=Plus/Plus
Query 106 CAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAG 165
|||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| |
Sbjct 315648 CAGAGACCGATAACGCACGAGTAGAGTGATCGAGGTCTGAAAAGCACTTTG-AAGGAGGG 315706
Query 166 TTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTG 225
| | || | ||| ||| |||||||| ||| || | || |||||||| || ||| | |
Sbjct 315707 TCACAACGTACGGGAA-TTGTTGAACGGG--GCTCATG--ACCAGACTCGCTCGCGG--G 315759
Query 226 CTCAACCGGCCCCTCG-GCCGGTGCAC---TC--TTCTGCGGTCAGGCCAGCATCAGCTC 279
| || |||| ||| ||||||| || || ||| | | | ||||| |||| |
Sbjct 315760 GTTAATCGGCAA-TCGTGCCGGTGTACAAGTCATTTCCCCCG-CGGGCCACTGTCAGTTT 315817
Query 280 GGGCGGTCGGATAAAGGCCCCGGGA--ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGG 337
|||| ||| ||| | | |||| || | ||||| | |||| |||||||||| |
Sbjct 315818 GGGC---CGGTCAAACTCTC-GGGACGATATCGCCCC--TAGGGGCTTGTTATAGCCGAG 315871
Query 338 GGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGG 397
||| ||| || | | | ||| |||||| | || || |||||
Sbjct 315872 GGT-------------CCTAAACCGGAGGATGTGCTTCGGCTACG---CTAGCAGAATGG 315915
Query 398 TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 457
| || |||| |||||| |||| ||||| ||| |||| ||||| |||||||||| ||
Sbjct 315916 T---AAACGGCTTGTCTTGAAACAGGGACCGAGG-GTCTGACATCG-TGCGAGTGTTCGG 315970
Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA---ACCCGTGAGGGTGCA 514
|| | | | | || || |||||||||||| | || | | ||||||
Sbjct 315971 GTATTG--CGGGGGGAAGTCGGGACAGTGAACGGAGGGAGTTCTTACACTTACAGGTGCA 316028
Query 515 CCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCC 574
| |||||||||||||| |||||| || ||||||||| |||||||| ||| ||| |
Sbjct 316029 CTATCGACCGATCCTGGACACTTCGGGTG-ATTTGAGTATGAGCATAGATGTGTGGATCT 316087
Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
| || ||||||||||| | |||||||| ||||| ||
Sbjct 316088 TGAGGAAGGTGAACTATGTCGGAATAGGGCGAAGCTAG 316125
>seq3
Length=5002383
Score = 113 bits (124), Expect = 2e-22
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167
||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| |
Sbjct 1045863 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAGATCACTTTGAAAAGAGAGGT 1045804
Query 168 AAAAAGCACGTGAAA 182
||||||| |||||||
Sbjct 1045803 AAAAAGCTCGTGAAA 1045789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999656800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |