Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1 212 3e-52 seq4 150 7e-34 seq3 113 2e-22 >seq1 Length=8587311 Score = 212 bits (234), Expect = 3e-52 Identities = 163/191 (85%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 10 GGTGGCCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTA 68 |||| || ||| ||||||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct 4832054 GGTGTCCGCGCCTGTGTGAAACTCCTTCGACGAGTCAAGTTGTTTGGGAATGTAGCTCTA 4831995 Query 69 AATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTA 128 |||||| || | ||||| || ||||| |||||||||| ||| ||||| ||||||||| Sbjct 4831994 AATGGGCGGGACATTTCATCCGAAGCTCAATATTGGCCGAGGACTGATAGTGCACAAGTA 4831935 Query 129 GAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTG 188 |||| || || |||| |||||||||||| ||||||||||| |||| ||||| ||||||| Sbjct 4831934 GAGTAATTGATAGATAAAAAGCACTTTGAAAAGAGAGTTAGAAAG--CGTGATATTGTTG 4831877 Query 189 AAAGGGAAGCG 199 ||||||||||| Sbjct 4831876 AAAGGGAAGCG 4831866 >seq4 Length=4347949 Score = 150 bits (166), Expect = 7e-34 Identities = 356/518 (69%), Gaps = 51/518 (10%) Strand=Plus/Plus Query 106 CAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAG 165 |||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| | Sbjct 315648 CAGAGACCGATAACGCACGAGTAGAGTGATCGAGGTCTGAAAAGCACTTTG-AAGGAGGG 315706 Query 166 TTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTG 225 | | || | ||| ||| |||||||| ||| || | || |||||||| || ||| | | Sbjct 315707 TCACAACGTACGGGAA-TTGTTGAACGGG--GCTCATG--ACCAGACTCGCTCGCGG--G 315759 Query 226 CTCAACCGGCCCCTCG-GCCGGTGCAC---TC--TTCTGCGGTCAGGCCAGCATCAGCTC 279 | || |||| ||| ||||||| || || ||| | | | ||||| |||| | Sbjct 315760 GTTAATCGGCAA-TCGTGCCGGTGTACAAGTCATTTCCCCCG-CGGGCCACTGTCAGTTT 315817 Query 280 GGGCGGTCGGATAAAGGCCCCGGGA--ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGG 337 |||| ||| ||| | | |||| || | ||||| | |||| |||||||||| | Sbjct 315818 GGGC---CGGTCAAACTCTC-GGGACGATATCGCCCC--TAGGGGCTTGTTATAGCCGAG 315871 Query 338 GGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGG 397 ||| ||| || | | | ||| |||||| | || || ||||| Sbjct 315872 GGT-------------CCTAAACCGGAGGATGTGCTTCGGCTACG---CTAGCAGAATGG 315915 Query 398 TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 457 | || |||| |||||| |||| ||||| ||| |||| ||||| |||||||||| || Sbjct 315916 T---AAACGGCTTGTCTTGAAACAGGGACCGAGG-GTCTGACATCG-TGCGAGTGTTCGG 315970 Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA---ACCCGTGAGGGTGCA 514 || | | | | || || |||||||||||| | || | | |||||| Sbjct 315971 GTATTG--CGGGGGGAAGTCGGGACAGTGAACGGAGGGAGTTCTTACACTTACAGGTGCA 316028 Query 515 CCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCC 574 | |||||||||||||| |||||| || ||||||||| |||||||| ||| ||| | Sbjct 316029 CTATCGACCGATCCTGGACACTTCGGGTG-ATTTGAGTATGAGCATAGATGTGTGGATCT 316087 Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 | || ||||||||||| | |||||||| ||||| || Sbjct 316088 TGAGGAAGGTGAACTATGTCGGAATAGGGCGAAGCTAG 316125 >seq3 Length=5002383 Score = 113 bits (124), Expect = 2e-22 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167 ||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| | Sbjct 1045863 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAGATCACTTTGAAAAGAGAGGT 1045804 Query 168 AAAAAGCACGTGAAA 182 ||||||| ||||||| Sbjct 1045803 AAAAAGCTCGTGAAA 1045789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999656800