Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq740 244 4e-62
seq1057 179 2e-42
seq107 120 1e-24
>seq740
Length=9614
Score = 244 bits (270), Expect = 4e-62
Identities = 163/191 (85%), Gaps = 3/191 (2%)
Strand=Plus/Minus
Query 10 GGTGGCCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTA 68
|||| || ||| ||||||| ||||||||||||||| ||||||||||||||| |||||||
Sbjct 9577 GGTGTCCGCGCCYGTGTGAARCTCCTTCGACGAGTCRAGTTGTTTGGGAATGYAGCTCTA 9518
Query 69 AATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTA 128
|||||| || | ||||| || ||||| |||||||||| ||| ||||| |||||||||
Sbjct 9517 AATGGGYGGKAMATTTCATCYRAAGCTMAATATTGGCCGRRGACYGATAGYGCACAAGTA 9458
Query 129 GAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTG 188
|||| || || |||| |||||||||||| ||||||||||| |||| ||||| |||||||
Sbjct 9457 GAGTRATYGAWAGATRAAAAGCACTTTGAAAAGAGAGTTARAAAG--CGTGAWATTGTTG 9400
Query 189 AAAGGGAAGCG 199
|||||||||||
Sbjct 9399 AAAGGGAAGCG 9389
>seq1057
Length=118734
Score = 179 bits (198), Expect = 2e-42
Identities = 355/518 (69%), Gaps = 51/518 (10%)
Strand=Plus/Minus
Query 106 CAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAG 165
|||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| |
Sbjct 40438 CAGAGACCGATAACGCACGAGTAGAGTGATCGARRKMTGAAAAGCACTTTG-AAGGAGGG 40380
Query 166 TTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTG 225
| | || | ||| ||| |||||||| ||| || | || |||||||| || ||| | |
Sbjct 40379 TCACAACGTACGGGAA-TTGTTGAAMGGG--GCTCATG--ACCAGACTCGCTCGCGG--G 40327
Query 226 CTCAACCGGCCCCTCG-GCCGGTGCAC---TC--TTCTGCGGTCAGGCCAGCATCAGCTC 279
| || |||| ||| ||||||| || || ||| | | | ||||| || | |
Sbjct 40326 GTTAATCGGCAT-TCGTGCCGGTGTACAAGTCATTTCCCCCG-CGGGCCASYGTCRGTTT 40269
Query 280 GGGCGGTCGGATAAAGGCCCCGGGA--ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGG 337
|||| ||| ||| | | |||| || | ||||| | |||| |||||||||| |
Sbjct 40268 GGGC---CGGTCAAACTCTC-GGGACGATATCGCCCC--TAGGGGCTTGTTATAGCCGAG 40215
Query 338 GGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGG 397
||| ||| || | | | ||| |||||| | || || |||||
Sbjct 40214 GGT-------------CCTAAACCGGAGGATGTGCTTCGGCTACG---CTAGCAGAATGG 40171
Query 398 TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 457
| || |||| |||||| |||| ||||| ||| |||| ||||| |||||||||| ||
Sbjct 40170 T---AAACGGCTTGTCTTGAAACAGGGACCGAGG-GTCTGACATCG-TGCGAGTGTTCGG 40116
Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA---ACCCGTGAGGGTGCA 514
|| | | | | || || |||||||||||| | || | | ||||||
Sbjct 40115 GTATTG--CGGGGGGAAGTCGGGACAGTGAACGGAGGGAGTTCTTACACTTACAGGTGCA 40058
Query 515 CCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCC 574
| |||||||||||||| |||||| || ||||||||| |||||||| ||| ||| |
Sbjct 40057 CTATCGACCGATCCTGGACACTTCGGGTG-ATTTGAGTATGAGCATAGATGTKKGGAYCY 39999
Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
| || ||||||||||| | |||||||| ||||| ||
Sbjct 39998 KRARGAWGGTGAACTATGYCKGAATAGGGCGAAGCTAG 39961
>seq107
Length=48661
Score = 120 bits (132), Expect = 1e-24
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167
||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| |
Sbjct 15579 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAARAKCACTTTGAAAAGAGAGKT 15638
Query 168 AAAAAGCACGTGAAA 182
||||||| |||||||
Sbjct 15639 AAAAAGCWCGTGAAA 15653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079974946400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |