Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq82 895 0.0 seq29 250 1e-63 >seq82 Length=8932 Score = 895 bits (992), Expect = 0.0 Identities = 599/665 (90%), Gaps = 2/665 (0%) Strand=Plus/Plus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 5299 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGCGGGTGGTA 5358 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 5359 AATTTCATCTAAAGCTAAATACTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 5418 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 5419 AGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 5478 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 | | |||||||| ||||| | | ||| |||| | |||| ||||||| |||| || Sbjct 5479 TTGTCCACCAGACTCGCCCGGGGGGGTTCAGCCGG-CACTCGTGCCGGTGTACTCCTCCC 5537 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 ||| | |||||||||| | | |||||| || ||||||||||||||||| | |||| | Sbjct 5538 CGGGCGGGCCAGCATCGGTTTGGGCGGCTGGTGAAAGGCCCCGGGAATGTAACACCCTCC 5597 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| | ||||||||||||||| |||| ||| |||||||| |||| ||||||| |||| Sbjct 5598 GGGGTGCCTTATAGCCCGGGGTGCCATGCAGCCAGCCTGGACCGAGGCCCGCGCTTCGGC 5657 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct 5658 GAGGATGCTGGCGTAATGGTGGTCAACGGCCCGTCTTGAAACACGGACCAAGGAGTCTAA 5717 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||||||||||||| ||||||||||||||| |||| | |||||| ||||||||||||| Sbjct 5718 CATCTATGCGAGTGTTCGGGTGTCAAACCCGTCCGCGCAGTGAAAGCGAACGGAGGTGGG 5777 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5778 AGCCCCCCGGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 5837 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 5838 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 5897 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5898 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 5957 Query 679 GGCGA 683 ||||| Sbjct 5958 GGCGA 5962 >seq29 Length=295006 Score = 250 bits (276), Expect = 1e-63 Identities = 155/165 (94%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 472 CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGA 531 |||| | ||||| |||||||||||||||||| | ||| |||||||||||||||||||| Sbjct 57817 CGCGAAGTGAAATCGAACGGAGGTGGGAACCCTTT-GGGCGCACCATCGACCGATCCTGA 57875 Query 532 TGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTAT 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57876 TGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTAT 57935 Query 592 GCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCA 636 |||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 57936 GCCTGAATAGGGCGAAGCCAAAGGAAACTCTGGTGGAGGCTCGCA 57980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995109400