Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq126 77.0 8e-12 seq52 75.2 3e-11 >seq126 Length=1347 Score = 77.0 bits (84), Expect = 8e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322 ||||||| ||||| |||| || |||| ||||| ||||||||||||||| |||||||| Sbjct 610 AACTGACGTTGAGGGACGAAGGCTTGGGTAGCAAGAAGGATTAGATACCCTAGTAGTCCA 551 Query 323 CGCCGTAAACGATGAAT 339 || | ||| ||||||| Sbjct 550 AGCAGAAAATGATGAAT 534 >seq52 Length=29153 Score = 75.2 bits (82), Expect = 3e-11 Identities = 106/149 (71%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 |||| ||| | |||| | | ||| || |||| ||| ||| || |||||||||| Sbjct 28503 GAATACCTGGAGTAGAGATAGAATTTGTTGATACCAGGGGGACTGTCAACGGCGAAGGCG 28562 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | | || |||||||| |||| |||| || |||| ||||||||||||||||| Sbjct 28563 TCCTTCTAAGTAATAACTGACGTTGAGAGACGAAGGCTTGGGTAGCAAACAGGATTAGAT 28622 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGA 337 ||||| ||||||| || | || ||||| Sbjct 28623 ACCCTAATAGTCCAAGCAGACAATGATGA 28651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203197256704