Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04-
07] 4,207 sequences; 31,150,696 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq3563 297 3e-78
seq2117 141 1e-31
seq1928 78.8 1e-12
>seq3563
Length=1576
Score = 297 bits (328), Expect = 3e-78
Identities = 222/258 (86%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 855
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||| | |||||||| |||| || ||| |||||||| ||||||||||||
Sbjct 854 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCTTAAGAAGCCAGC 796
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| | | | || |||||||||| || |||||||||||||||||| |||||
Sbjct 795 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 737
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||
Sbjct 736 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 677
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 676 AAGAGCTCTCAATCTGTC 659
>seq2117
Length=14657
Score = 141 bits (156), Expect = 1e-31
Identities = 104/120 (87%), Gaps = 1/120 (1%)
Strand=Plus/Minus
Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198
|||||||||| || |||||||||||||||||| |||||| |||||||||||||| |
Sbjct 482 GGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCTA 424
Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||| |||||| | ||| | |||||||||||||| ||||||||||
Sbjct 423 CCAACTAAGAACGGCCATACACCACTATCCAAAAGATCAAGAAAGAGCTCTCAATCTGTC 364
>seq1928
Length=3675
Score = 78.8 bits (86), Expect = 1e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC 53
|||| |||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 1580 CTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC 1530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796767526167
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |