Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1 163 5e-38
seq6 122 1e-25
seq8 78.8 1e-12
>seq1
Length=8787864
Score = 163 bits (180), Expect = 5e-38
Identities = 108/120 (90%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198
||||| |||||||||| |||||||| |||||||||| ||| || |||||||| |||||||
Sbjct 7764746 GGGCTGTTTAGCAGGTCAAGGTCTCTTTCGTTATCGCAATCAAGCAGACAAAACACTCCA 7764687
Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| || | ||||| ||||||||| ||||||||||
Sbjct 7764686 CCAACTAAGAACGGCCATGCACCACCACTCACAAAATCAGGAAAGAGCTCTCAATCTGTC 7764627
Score = 109 bits (120), Expect = 9e-22
Identities = 71/78 (91%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228
|||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 2134550 TTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATACACCACCGCCC 2134491
Query 229 ATAGAATCAAGAAAGAGC 246
| | | ||||||||||||
Sbjct 2134490 ACAAATTCAAGAAAGAGC 2134473
>seq6
Length=3941639
Score = 122 bits (134), Expect = 1e-25
Identities = 75/80 (94%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| |||||||||| |||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 332248 AAGCAGACAAATCTCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 332189
Query 240 AAAGAGCTATCAATCTGTCC 259
|||||||| |||||||||||
Sbjct 332188 AAAGAGCTCTCAATCTGTCC 332169
>seq8
Length=2807223
Score = 78.8 bits (86), Expect = 1e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 208 AACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||| | ||||||||||||||| ||||||||||
Sbjct 233201 AACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 233251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799899653
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |