Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1 163 5e-38 seq6 122 1e-25 seq8 78.8 1e-12 >seq1 Length=8787864 Score = 163 bits (180), Expect = 5e-38 Identities = 108/120 (90%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198 ||||| |||||||||| |||||||| |||||||||| ||| || |||||||| ||||||| Sbjct 7764746 GGGCTGTTTAGCAGGTCAAGGTCTCTTTCGTTATCGCAATCAAGCAGACAAAACACTCCA 7764687 Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| || | ||||| ||||||||| |||||||||| Sbjct 7764686 CCAACTAAGAACGGCCATGCACCACCACTCACAAAATCAGGAAAGAGCTCTCAATCTGTC 7764627 Score = 109 bits (120), Expect = 9e-22 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 2134550 TTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATACACCACCGCCC 2134491 Query 229 ATAGAATCAAGAAAGAGC 246 | | | |||||||||||| Sbjct 2134490 ACAAATTCAAGAAAGAGC 2134473 >seq6 Length=3941639 Score = 122 bits (134), Expect = 1e-25 Identities = 75/80 (94%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 332248 AAGCAGACAAATCTCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 332189 Query 240 AAAGAGCTATCAATCTGTCC 259 |||||||| ||||||||||| Sbjct 332188 AAAGAGCTCTCAATCTGTCC 332169 >seq8 Length=2807223 Score = 78.8 bits (86), Expect = 1e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 208 AACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 233201 AACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 233251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799899653