Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq346 105 3e-17 >seq346 Length=478327 Score = 105 bits (116), Expect = 3e-17 Identities = 216/315 (69%), Gaps = 6/315 (2%) Strand=Plus/Minus Query 12734 ACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCA 12793 |||||||| ||| || |||| || | ||||||| || ||||| | |||||| ||| Sbjct 396437 ACATCGTAGTAGATGACGCTCATTCCCATTGACTCTGCCAGCACAGACAGCTGAGATCCA 396378 Query 12794 ATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAG-- 12851 |||| |||||||| | |||||| | || || ||||||| || | ||| ||| | Sbjct 396377 ATGTGCCCATAACCAATTATACCCAAAGTTTTCCCTCTAATCTCCCAGCATT-TTGCGCT 396319 Query 12852 AAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 || | ||||||||| | |||| ||| | ||| | | | ||||| | || |||| | Sbjct 396318 AACT-TTGTTCCAAGTCCCTTTGTGCATTTCCATACTGCGGTCTCCGAATTGTCGAGCGA 396260 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971 | || | || || |||||||| || || || || || ||| | || || |||| Sbjct 396259 GCGCGATGATTTCGCCAATGATGAGTTCGGCAACAGATCGAGAGTTTGAGAAAGGCGAAT 396200 Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGAT-CGTAACCAATG 13030 | || || ||||| || ||| | || | | ||| | ||||||| |||| || ||| Sbjct 396199 TGAAAACCGCAATTCCATGTTCAGCGGCAAATTGTAGGTCCACCTGATTCGTA-CCGATG 396141 Query 13031 CAGAAGCATCCTATG 13045 |||||||| || ||| Sbjct 396140 CAGAAGCAGCCGATG 396126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884869446624886