Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq57 226 4e-57 >seq57 Length=3987 Score = 226 bits (250), Expect = 4e-57 Identities = 177/206 (86%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 2015 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1958 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 1957 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 1898 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| ||||| | |||||||| | ||||||||||||||||||| Sbjct 1897 ACCCAGACCTTTCGGTCAAGGAAGGA-ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 1839 Query 180 GCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||||||||||||||||| Sbjct 1838 GCCCAGAACATCTAAGGGCATCACAG 1813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999482765