Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq57 203 2e-50 seq22 89.7 3e-16 >seq57 Length=3987 Score = 203 bits (224), Expect = 2e-50 Identities = 115/117 (98%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 927 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 868 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 867 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 811 >seq22 Length=1119900 Score = 89.7 bits (98), Expect = 3e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 55 TCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106 |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1099589 TCGCCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTG 1099640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399814690