Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq57 517 2e-144
seq10 165 1e-38
seq24 107 4e-21
>seq57
Length=3987
Score = 517 bits (572), Expect = 2e-144
Identities = 303/314 (96%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||
Sbjct 496 TGGTCCGGCCGGGTCTTTCCTTCTGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 555
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 556 ATCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 615
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 616 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 675
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 676 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTAAATTGTCAGAGGTGAAATTCTTGG 735
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 736 ATTTATTTAAGACTAACTACTGCGAAAGCATTCACCAAGGATGTTTTCATTAATCAGTGA 795
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 796 ACGAAAGTTAGGGG 809
>seq10
Length=1543492
Score = 165 bits (182), Expect = 1e-38
Identities = 108/119 (91%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||| |||| |||| | ||| ||||||||||||||||||||||| ||||||
Sbjct 858509 TGGTCCGGCCGGGTCTTTTCTTCGGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 858450
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123
||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||
Sbjct 858449 ATCAGGACTTTTACTTTGAAAAAGTTGGAGTGTTCAAAGCAGGCCTATGCTCGAATACA 858391
>seq24
Length=1007869
Score = 107 bits (118), Expect = 4e-21
Identities = 83/99 (84%), Gaps = 6/99 (6%)
Strand=Plus/Plus
Query 8 TCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCC 67
||| |||| | ||||||||||| ||| ||||||||||||||||||||||| |||||| |
Sbjct 261758 TCCAGCCGAGTCTTTCCTTCTGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGAATC 261817
Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG 106
| | || |||||||||||||||||||||||||||
Sbjct 261818 AAG------ACGTTGAAAAAATTAGAGTGTTCAAAGCAG 261850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199350208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |