Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq57 517 2e-144 seq10 165 1e-38 seq24 107 4e-21 >seq57 Length=3987 Score = 517 bits (572), Expect = 2e-144 Identities = 303/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct 496 TGGTCCGGCCGGGTCTTTCCTTCTGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 555 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 556 ATCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 615 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 616 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 675 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 676 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTAAATTGTCAGAGGTGAAATTCTTGG 735 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 736 ATTTATTTAAGACTAACTACTGCGAAAGCATTCACCAAGGATGTTTTCATTAATCAGTGA 795 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 796 ACGAAAGTTAGGGG 809 >seq10 Length=1543492 Score = 165 bits (182), Expect = 1e-38 Identities = 108/119 (91%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||| |||| |||| | ||| ||||||||||||||||||||||| |||||| Sbjct 858509 TGGTCCGGCCGGGTCTTTTCTTCGGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 858450 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 ||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| Sbjct 858449 ATCAGGACTTTTACTTTGAAAAAGTTGGAGTGTTCAAAGCAGGCCTATGCTCGAATACA 858391 >seq24 Length=1007869 Score = 107 bits (118), Expect = 4e-21 Identities = 83/99 (84%), Gaps = 6/99 (6%) Strand=Plus/Plus Query 8 TCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCC 67 ||| |||| | ||||||||||| ||| ||||||||||||||||||||||| |||||| | Sbjct 261758 TCCAGCCGAGTCTTTCCTTCTGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGAATC 261817 Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG 106 | | || ||||||||||||||||||||||||||| Sbjct 261818 AAG------ACGTTGAAAAAATTAGAGTGTTCAAAGCAG 261850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199350208