Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq57 895 0.0 >seq57 Length=3987 Score = 895 bits (992), Expect = 0.0 Identities = 613/685 (89%), Gaps = 7/685 (1%) Strand=Plus/Plus Query 1 TACGTGACCGGTGGCCT-AGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 |||||||| |||| | | |||||| |||||| |||||||||||||||||||||||||| Sbjct 3199 TACGTGACTGGTGCCAGCATCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAAT 3258 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 ||||||| |||| || |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 3259 GCAGCTCAAAATTGGTGGTAAATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGC 3318 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 3319 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTG 3378 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCG-GCCCC 238 ||||||||||||||||||||||||||| ||||||||| || || | ||| ||| | | Sbjct 3379 AAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTTGCAGGCGGTCGATCATCCGAGGTTC 3438 Query 239 TCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCC 298 || ||||||||||| | ||||||||||||| | | || ||| |||||||||| Sbjct 3439 TCC-CCGGTGCACTCGATCGTCTTCAGGCCAGCATCGGTTTCGGTGGTGGGATAAAGGCT 3497 Query 299 CCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGG 358 ||||||||||| | ||||| | ||||||||||| |||| ||||| ||| || || Sbjct 3498 GTGGGAATGTGGCTC--TTCGGAG--TGTTATAGCCCACGGTGCAATGCTGCCTACCGGG 3553 Query 359 ACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGA 418 || |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| | Sbjct 3554 ACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAA 3613 Query 419 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAA 478 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 3614 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATACGCGTAA 3673 Query 479 TGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTC 538 |||||||||||||||||| || ||| | |||| ||| ||||||||||||||||||||||| Sbjct 3674 TGAAAGTGAACGGAGGTGAGAGCCCTTTAGGGCGCATCATCGACCGATCCTGATGTCTTC 3733 Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 3734 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCGTGAA 3793 Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3794 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGA 3853 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||| |||||||||||| Sbjct 3854 TCGTCAAATTTGCGTATAGGGGCGA 3878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998477050