Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq57 895 0.0
>seq57
Length=3987
Score = 895 bits (992), Expect = 0.0
Identities = 613/685 (89%), Gaps = 7/685 (1%)
Strand=Plus/Plus
Query 1 TACGTGACCGGTGGCCT-AGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59
|||||||| |||| | | |||||| |||||| ||||||||||||||||||||||||||
Sbjct 3199 TACGTGACTGGTGCCAGCATCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAAT 3258
Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119
||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3259 GCAGCTCAAAATTGGTGGTAAATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGC 3318
Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 3319 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTG 3378
Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCG-GCCCC 238
||||||||||||||||||||||||||| ||||||||| || || | ||| ||| | |
Sbjct 3379 AAATTGTTGAAAGGGAAGCGCTTGCAATCAGACTTGCAGGCGGTCGATCATCCGAGGTTC 3438
Query 239 TCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCC 298
|| ||||||||||| | ||||||||||||| | | || ||| ||||||||||
Sbjct 3439 TCC-CCGGTGCACTCGATCGTCTTCAGGCCAGCATCGGTTTCGGTGGTGGGATAAAGGCT 3497
Query 299 CCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGG 358
||||||||||| | ||||| | ||||||||||| |||| ||||| ||| || ||
Sbjct 3498 GTGGGAATGTGGCTC--TTCGGAG--TGTTATAGCCCACGGTGCAATGCTGCCTACCGGG 3553
Query 359 ACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGA 418
|| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 3554 ACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAA 3613
Query 419 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAA 478
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 3614 ACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATACGCGTAA 3673
Query 479 TGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTC 538
|||||||||||||||||| || ||| | |||| ||| |||||||||||||||||||||||
Sbjct 3674 TGAAAGTGAACGGAGGTGAGAGCCCTTTAGGGCGCATCATCGACCGATCCTGATGTCTTC 3733
Query 539 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3734 GGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCGTGAA 3793
Query 599 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3794 TAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGA 3853
Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||| ||||||||||||
Sbjct 3854 TCGTCAAATTTGCGTATAGGGGCGA 3878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079998477050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |