Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq60 208 1e-51 >seq60 Length=2671 Score = 208 bits (230), Expect = 1e-51 Identities = 115/115 (100%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1765 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 1706 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1705 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 1651 Score = 161 bits (178), Expect = 2e-37 Identities = 89/89 (100%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1274 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 1215 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 1214 TAGGCCACACTTTCATGGTTTGTATTCAC 1186 Score = 149 bits (164), Expect = 1e-33 Identities = 88/92 (96%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 2136 TACTAAGCTGAATTACCATTGCGGTGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 2077 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 2076 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 2045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399393376