Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq57 172 7e-41
seq10 86.0 7e-15
>seq57
Length=3987
Score = 172 bits (190), Expect = 7e-41
Identities = 157/193 (81%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 666 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 607
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| |||||||||||| |||| | ||
Sbjct 606 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCCCGACA 547
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182
|| ||| |||| ||||| | ||||| || ||| || | || |||| | |||
Sbjct 546 CACCCAGTGAAGGGCATGC-GGCTCCTCAGAAGGAAAGACCCGGCCGGACCAGTGCACGC 488
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 487 GGTGAGGCGGACC 475
>seq10
Length=1543492
Score = 86.0 bits (94), Expect = 7e-15
Identities = 74/89 (83%), Gaps = 2/89 (2%)
Strand=Plus/Plus
Query 58 TGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT 117
|||||||| || || ||||||||||||||||| || ||| |||| |||||||||||| ||
Sbjct 858391 TGTATTCGAGCATAGGCCTGCTTTGAACACTCCAACTTTTTCAAAGTAAAAGTCCTGATT 858450
Query 118 CCTCCGCACA-CCAATGAA-GGCATACGG 144
|| | |||| ||| |||| ||||| |||
Sbjct 858451 CCCCGACACACCCAGTGAAGGGCATGCGG 858479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199590614
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |