Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq57 172 7e-41 seq10 86.0 7e-15 >seq57 Length=3987 Score = 172 bits (190), Expect = 7e-41 Identities = 157/193 (81%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 666 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 607 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| |||||||||||| |||| | || Sbjct 606 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGATTCCCCGACA 547 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 || ||| |||| ||||| | ||||| || ||| || | || |||| | ||| Sbjct 546 CACCCAGTGAAGGGCATGC-GGCTCCTCAGAAGGAAAGACCCGGCCGGACCAGTGCACGC 488 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 487 GGTGAGGCGGACC 475 >seq10 Length=1543492 Score = 86.0 bits (94), Expect = 7e-15 Identities = 74/89 (83%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 58 TGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT 117 |||||||| || || ||||||||||||||||| || ||| |||| |||||||||||| || Sbjct 858391 TGTATTCGAGCATAGGCCTGCTTTGAACACTCCAACTTTTTCAAAGTAAAAGTCCTGATT 858450 Query 118 CCTCCGCACA-CCAATGAA-GGCATACGG 144 || | |||| ||| |||| ||||| ||| Sbjct 858451 CCCCGACACACCCAGTGAAGGGCATGCGG 858479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199590614