Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq57 291 8e-77 seq10 89.7 5e-16 >seq57 Length=3987 Score = 291 bits (322), Expect = 8e-77 Identities = 180/191 (94%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 553 GGAATCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 612 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 613 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 671 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 672 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTAAATTGTCAGAGGTGAAATTC 731 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 732 TTGGATTTATT 742 >seq10 Length=1543492 Score = 89.7 bits (98), Expect = 5e-16 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| ||||||||||||||||||||| || ||| ||||||||||||||| |||||||||| Sbjct 858452 GGAATCAGGACTTTTACTTTGAAAAAGTTGGAGTGTTCAAAGCAGGCCTATGCTCGAATA 858393 Query 61 CA 62 || Sbjct 858392 CA 858391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999647840