Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq57 562 9e-158
seq66 452 1e-124
seq24 116 1e-23
>seq57
Length=3987
Score = 562 bits (622), Expect = 9e-158
Identities = 328/339 (97%), Gaps = 0/339 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 339 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 280
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 279 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 220
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 219 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 160
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 159 AGCCAAGACCATACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 100
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 99 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 40
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTT 339
|||||||||||||||||||||||||||||||||| ||||
Sbjct 39 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTT 1
>seq66
Length=1696
Score = 452 bits (500), Expect = 1e-124
Identities = 256/260 (98%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1696 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCATTGGTTTTT 1637
Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1636 TATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAGAATT 1577
Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1576 ACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 1517
Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1516 TTCGCAGTTTCACGGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 1457
Query 485 AAGCATATGACTACTGGCAG 504
||||||||||||||||||||
Sbjct 1456 AAGCATATGACTACTGGCAG 1437
>seq24
Length=1007869
Score = 116 bits (128), Expect = 1e-23
Identities = 79/89 (89%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGT 263
|||| | | ||| || |||||||||| ||||||||| |||||||||| ||||||||||||
Sbjct 230905 TTGACAAGCCAGGAACTTGAATGAACTATCGCCGGCACAAGGCCATGGGATTCGTTAAGT 230964
Query 264 TATTATGAATCACCAAGGAGCCCCGAAGG 292
|||||||||| |||||||||||||||||
Sbjct 230965 CATTATGAATCGCCAAGGAGCCCCGAAGG 230993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510398927616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |