Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq57 562 9e-158 seq66 452 1e-124 seq24 116 1e-23 >seq57 Length=3987 Score = 562 bits (622), Expect = 9e-158 Identities = 328/339 (97%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 339 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 280 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 279 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 220 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 219 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 160 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| | | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 159 AGCCAAGACCATACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 100 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 99 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 40 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTT 339 |||||||||||||||||||||||||||||||||| |||| Sbjct 39 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTT 1 >seq66 Length=1696 Score = 452 bits (500), Expect = 1e-124 Identities = 256/260 (98%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1696 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCATTGGTTTTT 1637 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1636 TATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAGAATT 1577 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1576 ACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 1517 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1516 TTCGCAGTTTCACGGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 1457 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 1456 AAGCATATGACTACTGGCAG 1437 >seq24 Length=1007869 Score = 116 bits (128), Expect = 1e-23 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGT 263 |||| | | ||| || |||||||||| ||||||||| |||||||||| |||||||||||| Sbjct 230905 TTGACAAGCCAGGAACTTGAATGAACTATCGCCGGCACAAGGCCATGGGATTCGTTAAGT 230964 Query 264 TATTATGAATCACCAAGGAGCCCCGAAGG 292 |||||||||| ||||||||||||||||| Sbjct 230965 CATTATGAATCGCCAAGGAGCCCCGAAGG 230993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398927616