Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq42 387 1e-102
seq4 118 8e-22
>seq42
Length=298824
Score = 387 bits (428), Expect = 1e-102
Identities = 1241/1890 (66%), Gaps = 74/1890 (4%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| || |||||||| | | | ||| ||| |||| | |||||||||||||| ||
Sbjct 241566 TCGACAGTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTT 241625
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
|| || || ||| || ||| ||||| || | || |||| | | | || ||
Sbjct 241626 TTCAGACCCAACTTCCAGCCAGCGAAGTGCATAC-TGGTGATCTTGCCCATTGTGGGATC 241684
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || |||| ||| || || || |||||| |||||| || || |||||
Sbjct 241685 CTTCATGTGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCAT 241744
Query 65257 GT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCT 65312
| | ||| | || || || || ||||| ||||||||||| || | | | | |
Sbjct 241745 TTGGACGATGGTTCGCTGT---GAGATTTCCCAAACGGTCTTGTAAAGA-GCCTTGATAT 241800
Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372
|| ||| || | |||| ||| | || |||| | ||||| || || || ||
Sbjct 241801 CAGCTGGGATGTTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCA 241860
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATG 65428
| || ||||| | ||||| || | ||||| |||| |||| | | |||| |
Sbjct 241861 TGTTGTCAGACCAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGG----TTGACG 241916
Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488
|||||||||||||| | || |||||||| |||||||||||||| || ||||||
Sbjct 241917 ACTTGGAACTCGCCAGCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAG 241976
Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548
| ||| || ||| |||||||| || ||||||||||| |||||||| | |||
Sbjct 241977 CACTCATTGAAGCCAAGAATTTGACTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAG 242036
Query 65549 GAGTTTCGCAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCG 65606
|| || | || ||| || || || || ||| |||||| | ||| | |
Sbjct 242037 CTATTGCGAAGACCATGTTGCTTG--ATTTTCTGCTTCAAGCTGTCCCAATCCCAGA--G 242092
Query 65607 GTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTG 65666
| | | | | | ||| ||||||||| | |||| || | ||| || |
Sbjct 242093 ATCTGTTGGAGTAA--CACC--CCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAG 242148
Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTG--GTCTCGAG 65724
|||| || | || || || || |||||||||| | || ||| | |||
Sbjct 242149 AACCCTCAAATGTCTCATAAGTGCCATCAACCTTGGCAAGCT--CAACTGAAGCAGTGAG 242206
Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC-- 65782
||||||| || ||||||||||| || | || | ||| | |||| | | ||
Sbjct 242207 TGCGGCATGGTAGATGGTCTCGAAGAT---TTGAAT--GTTGAGGTGCTTGGCCTCTGGA 242261
Query 65783 ---TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCG 65839
||| | || | || | | |||| || || ||||| || || |||| ||
Sbjct 242262 GAGTCGAATGGAAGACGAAGAGCCAAGAAAGCATCAGCAAGACCCTGGACACCAACGGCG 242321
Query 65840 ATGGGACGATGACGCAAATTGGAACGTCTC---GCCTCAGGTACAGGGTAGTAATTGATA 65896
|| || || || || || ||| | |||| || || || |||||||| || |||| |
Sbjct 242322 ATAGGTCGGTGGCGGAAGTTG---CTTCTCTTGGCTTCGGGAACAGGGTAATAGTTGACA 242378
Query 65897 TCGATAATGCGATTCAAATTGCGTGTCACC-ACATGCACGA-TACGTCGCAATTGTTCGA 65954
|| || || ||||| || | || || | || || || | ||| | | | | ||
Sbjct 242379 TCAATGATCTTGTTCAAGTT-CTTGACAACGACTTGGCAGACTTCGT-GAAGTCTCTGGA 242436
Query 65955 AATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAG 66014
| ||| || || | || | | || || ||| | | ||||||||||| |
Sbjct 242437 AGTCATAA-GT----GCCGTTGTTCA-TGTCG------ACATAGGTAGGAAGGGCAAGTG 242484
Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074
| || | ||||||||| || | ||| || ||||| ||||| ||||| || ||||| |
Sbjct 242485 AAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAGTACTCAACAATCTCAGTGCAGA 242544
Query 66075 GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCT 66134
| || || || ||||| || | ||||| || || ||||| | ||||| |||||||
Sbjct 242545 GGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGTTGCTCTTTCTGTTGCAAGCATCCT 242604
Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAG 66194
|||| | |||| | ||| |||| ||||| || | ||| | ||||| || ||| ||
Sbjct 242605 TGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTCCAGGATGGAGTACCAGAGCT 242664
Query 66195 CGCGTGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGT 66253
| ||||| | || | | | |||| ||||| ||| || || || ||||||||
Sbjct 242665 TTTGCGCCTTGATGGT-CTTGCGACCCTTACCTTCGCGCTCATACTGCTCGTAGAGAGCC 242723
Query 66254 TCGAAGGATTCACC-CCATA--CTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310
||||| |||| | ||||| | || | || | ||| |||| | || |||||||
Sbjct 242724 TCGAA---TTCATCGCCATAGACATCAGCCAAGCCTGGGCACTCATTGGGGCACATCAAA 242780
Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370
| ||| || |||| || ||| || || ||| || |||||||| ||||| |||||||||
Sbjct 242781 GTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGGAATCCACAGGGCGTAG 242840
Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430
|||||||| || ||||| |||||| |||||||||| || || | || ||| ||||
Sbjct 242841 AAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAAGATCAAGGTACTCG 242900
Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490
|||| ||||| |||||||| || || ||||| ||||| | || || ||| |||
Sbjct 242901 AAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAGCACCTGGTCGCTTGTTACCA 242960
Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550
|||||||| ||||| ||||| ||||||||||| || | ||| || |||| |||||
Sbjct 242961 CCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGACGATGCCGTTC 243020
Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG-TGAACATTCAG 66609
|| || ||||| || || | ||| || ||| || || || ||| ||||| || ||
Sbjct 243021 GAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCGCGGAT-TCGATGAACGTTGAG 243079
Query 66610 ACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCC 66669
||||| ||||| || |||| || || || ||| || ||| | | || ||
Sbjct 243080 GCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGTGTCGTAGATACC 243139
Query 66670 GTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGT 66729
||| || ||| |||| ||| | ||| | |||||| ||||||| || || ||
Sbjct 243140 GTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTGGGCTTGTGGAGT 243199
Query 66730 GGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTA 66789
| || | |||||| || || | ||| ||||| ||| | | | ||||| ||||||
Sbjct 243200 ACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTCTGGGACATCAGATTGTA 243259
Query 66790 CGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAG 66849
||||| || |||| || || | ||| || ||||| |||| ||| |||||| | |
Sbjct 243260 TGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCTACTCGCATAATCAT 243319
Query 66850 GTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909
|| ||| || |||||| | | | |||| | | | ||| || || || || ||
Sbjct 243320 GTGTTGTGGGCGTTCGCAGATCTTGCCATTGAGGCGGAGGAGGTATGATCGCTCGAGAGT 243379
Query 66910 CTTGATACCAAAGTACGAGTAATTGAAATC 66939
||||| |||||||| ||||||||||||
Sbjct 243380 CTTGAAGCCAAAGTATTGGTAATTGAAATC 243409
>seq4
Length=1888314
Score = 118 bits (130), Expect = 8e-22
Identities = 328/500 (66%), Gaps = 5/500 (1%)
Strand=Plus/Minus
Query 61434 GAAAGCGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGAT 61492
||| || || ||||| |||| ||||| || | | ||| ||||||||| | ||||
Sbjct 1224638 GAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACT-CTACATTTGCTCAACGTC 1224580
Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552
| | ||||| || | ||||||||| | || |||||||| || || || | ||||| |
Sbjct 1224579 TCGTCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTCGCGTCCATCTTCT 1224520
Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612
|||||||||| ||||| |||||| | ||||| |||||| |||||| | || || || |
Sbjct 1224519 GGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACCTTCTCCAATGAACTCATCTCTCGTG 1224460
Query 61613 ACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC 61672
||||||| | || || |||||| | || ||| | || || | | || |
Sbjct 1224459 ACGAGGGTCTCCACACCGACTTTGCTTGCCTTCTCTTCTCTCACT---TGAAGCACCGCC 1224403
Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| || | ||| || | || || || || || || || || ||
Sbjct 1224402 CAAGCAAGCAAGCTGTCCAAGACGTCATTACCGAAGCTGTCGAGATTGAGCAAGAGTTCT 1224343
Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792
||||||| ||| | || ||||| | |||||||| | || ||| ||| || |
Sbjct 1224342 TGACTGAGGCTCTTCCTTGTGCACTCCTTGGCATGAACTCGAATCTGATGAAGCAATACA 1224283
Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852
| || || || || || |||||| | | | | || | || | |||| || |
Sbjct 1224282 TCGAGTTCGTCGCTGATCGTCTGCTTCTTGCCCTCGGCAATGAGAAGGTCTACAAGTCTG 1224223
Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912
||||||||||| || ||||| | || ||||| | ||||||||| || || || ||||
Sbjct 1224222 CCAACCCATTTGACTTTATGGAGAACATCTCGCTCGCTGGCAAGACTAACTTCTTTGAGA 1224163
Query 61913 AACGTGTAGGCGACTATCAA 61932
| || || || ||||| |||
Sbjct 1224162 AGCGCGTTGGTGACTACCAA 1224143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567655979440
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