Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1 513 3e-143
seq80 73.4 7e-11
>seq1
Length=9468
Score = 513 bits (568), Expect = 3e-143
Identities = 302/314 (96%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||
Sbjct 674 TGGTCCGGCCGGGTCTTTCCTTCTGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 733
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 734 GTCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 793
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 794 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 853
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 854 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 913
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 914 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 973
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 974 ACGAAAGTTAGGGG 987
>seq80
Length=498172
Score = 73.4 bits (80), Expect = 7e-11
Identities = 49/55 (89%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 8 TCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGG 62
|| |||| || ||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct 172594 TCTGGCCCGGTCTTTCCTTCTGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGG 172540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915198123840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |