Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1 513 3e-143 seq80 73.4 7e-11 >seq1 Length=9468 Score = 513 bits (568), Expect = 3e-143 Identities = 302/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct 674 TGGTCCGGCCGGGTCTTTCCTTCTGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 733 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 734 GTCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 793 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 794 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 853 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 854 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 913 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 914 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 973 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 974 ACGAAAGTTAGGGG 987 >seq80 Length=498172 Score = 73.4 bits (80), Expect = 7e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 8 TCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGG 62 || |||| || ||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct 172594 TCTGGCCCGGTCTTTCCTTCTGAGGAGCCGCATGCCCTTCACTGGGTGTGTCGGG 172540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198123840