Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1 306 6e-81
>seq1
Length=9468
Score = 306 bits (338), Expect = 6e-81
Identities = 237/278 (85%), Gaps = 3/278 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 5257 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 5314
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5315 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 5374
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || |||| ||||| |||||||||||||||||||||||||||||||||| | |
Sbjct 5375 GAACGCGGCGATTTTCTCCCACACATCGTAGTCGGATACGAATAGGCTTCGGCCCTGCAT 5434
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|||||| || |||| || | | |||| || | || ||||| || |||||
Sbjct 5435 CTTAGCTGGTTGGCATTTGGGCTGTGGTGGAATTCCGCAGTCCT-AGCTGACGTCTTGCA 5493
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| |||||||| |||||||| |||||||| |||||
Sbjct 5494 ATTTTACCATGCGTGGGGATAAAACCTTTGCATACGAC 5531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819198373120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |