Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq33 809 0.0 seq122 80.6 8e-13 seq5 80.6 8e-13 >seq33 Length=565 Score = 809 bits (896), Expect = 0.0 Identities = 483/504 (96%), Gaps = 3/504 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 512 GTACTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 453 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452 CCCCGTATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 393 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 392 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 333 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 332 AGCCACTACCTTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 273 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| Sbjct 272 CAAGGCCATGCGATTCGTTTAGTTATTATGAATCACCAAAGAGCCCCGAAGGGCATTGGT 213 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 212 TTTTTATCTAATAAATACACCCCTTCCGAAGTTGGGGTTTTTAGCATGTATTAGCTCTAG 153 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||| Sbjct 152 AATTACCACAGTTATCCAGGTA--AAGGTACTATCAAATAAACTATAACTGATTTAATGA 95 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 94 GCCATTCGCAGTTTCACAGTAT-GATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 36 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 35 AGACAAGCATATGACTACTGGCAG 12 >seq122 Length=1472 Score = 80.6 bits (88), Expect = 8e-13 Identities = 44/44 (100%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1472 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1429 >seq5 Length=1001 Score = 80.6 bits (88), Expect = 8e-13 Identities = 44/44 (100%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398021376