Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 297 2e-75 seq73 217 1e-51 >seq2 Length=1003996 Score = 297 bits (328), Expect = 2e-75 Identities = 775/1161 (67%), Gaps = 42/1161 (4%) Strand=Plus/Minus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCC 65872 ||||| |||||||| || |||| ||||||||| || || | || ||| | ||| | | Sbjct 557166 TCGGCGAGACCTTGGACACCAAGACCGATGGGTCGGTGTCTGAAGTTGCT-CTTCTTGGC 557108 Query 65873 T-CAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATG 65931 | | ||||||||||| ||||| ||||| || ||||| ||||| ||||| || || Sbjct 557107 TTCTTCAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTGCGGGTCACAACTTG 557048 Query 65932 CACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACA 65990 ||| ||| ||| | |||| || | | || | ||||| || | || Sbjct 557047 AGCGACCTCGT-GCAGACGACCGAAGTCGTATTC------ACCA-CGGGACTG---GTCA 556999 Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050 | | || || || | | ||| || | |||||||||||| | ||| || ||||| | Sbjct 556998 ACGAATGCT--GGCAGCGACAAAGAAGCCAAGTTGCAGACAGCGACCTCATCCGGAGCAG 556941 Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110 | ||||||| || || ||||||| || || || |||||||| | || | || | Sbjct 556940 TGTACTCGATGATCTCAGTGCACAAGTTGGAGCTCCGGATGGTGCCAAGGTTTTTCTGGT 556881 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | |||||| ||||| ||||||||||| | |||||| || |||||||| || || | Sbjct 556880 TGGACTTGCGGTTGCAAGCATCCTTGTAGAGCATGTATGGGGTGCCGGTTTCGGTCTGAG 556821 Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT--ACGTACCGCCCTACCTTT 66228 ||| | ||||||| ||| || |||| || | || || |||| | ||||| Sbjct 556820 CCTCGAGAATGGCGTACCAGAGCTTTTGTGCTTTGATGGTCGACCTACCACG--ACCTTC 556763 Query 66229 GCGTTCGTAA-TGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATG 66287 | ||||| || | ||| || ||||| ||| || | || || | |||| || Sbjct 556762 TTGCTCGTATCTGGT-GTACAGAGCCTCGAACTCTTCGCCGTACACATCAGCTAGACCTG 556704 Query 66288 GACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATA 66347 | |||| || ||| |||||||| | |||||| | || || ||||| |||| || | Sbjct 556703 GGCACTCGTTTGGGCACATCAGTGTCCAATCTTGGTTCTTCTCCACACGCTGCATGAACA 556644 Query 66348 GATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGAT 66407 |||||| |||| | | ||||||| || || || || || ||| || ||||||| | Sbjct 556643 AATCAGGCGTCCACAAGCCGTAGAACAGGTCTCGAGCGCGGACCTCTTCCTTGCCGTGGT 556584 Query 66408 TTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGA 66467 | ||||| | || ||| ||||| ||||| || || |||||||| || ||||| | ||| | Sbjct 556583 TCTTGCGTAGGTTGAGAAACTCGAAGATATCAGCGTGCCATGGCTCGAGGTACACGGCAA 556524 Query 66468 ACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACAC 66527 | | ||| ||| ||| ||||||||| || || |||||||| ||||||||||| | Sbjct 556523 ATGCACCCGGACGCTTGTTGCCACCTTGATCAACATAGCGAGCAGTGTTGTTGAAGACTC 556464 Query 66528 GCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTG 66587 || ||| || | ||| || || || | || || ||||| | ||| ||| || | Sbjct 556463 TCAGCATGGGAATGAGGCCATTGGAGGTACCGTTTGTGCCCGCAATGTAGGAGCCAGTGG 556404 Query 66588 CCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-A 66646 | || || |||| | || ||||||| |||||| || |||| ||||| ||||| Sbjct 556403 CACGGATGCAGTGAGCGTTGAGACCAACACCACCAGCACTCTTTGAGATCATGGCACATG 556344 Query 66647 TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705 || | | | || | | ||||| |||||| ||| ||| ||| | |||| |||| Sbjct 556343 TCTTGAGAGTATC--GTAGATGCCATCAATGCTGTCCGACTTCATGTCGATGAGGAAGCA 556286 Query 66706 TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 || ||||| || | ||| ||| | || | ||| || || |||| ||||| || || Sbjct 556285 AGACGACAGTTGTGGGTGGGGCGTGCCAGCTGCGAACAGTGTTGGTGAGGCGTGTGTGAA 556226 Query 66766 GTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAAT 66825 | | | |||| | ||||| ||||||||| | |||| || || || || || Sbjct 556225 GGTCTTCTGGGACAAGAGGTTGTAGGTCTCGATGGCCTTCTCAACGTCGTCACCGTGGAT 556166 Query 66826 CCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA-------GCCGATCC 66877 || | || ||| ||||||| | || ||||| | ||| ||| |||||| | Sbjct 556165 GCCAACAGCGACA-CGCATCAACATGTGCTGAGGTCTCTCGGCCACCTTCTTGCCGAT-C 556108 Query 66878 TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAA 66937 |||| || | ||| || || || || ||||||| || ||||| ||| ||||| Sbjct 556107 TTGA---GC---AGGTATGATCGCTCAAGTGTCTTGAAGCCGAAGTATTGGTAGTTGAAG 556054 Query 66938 TCGTTAGCATGCACGATGGCC 66958 || ||| ||||||||| Sbjct 556053 TCTCGGTCATAGACGATGGCC 556033 Score = 109 bits (120), Expect = 4e-19 Identities = 325/491 (66%), Gaps = 9/491 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| ||||| || || || ||| |||| | || ||||||||||| ||| Sbjct 557894 TCGACGGTGAATTGGATAGCGC-AGAGGCGGCCATGGTACGGAGGTAGTACATGCCAGTC 557836 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 ||||| || ||| || ||| ||||| | || |||| |||| | ||||||| Sbjct 557835 TTGAGACCCATCTTCCAGCCAGCGAAGTGCAT-GCTGGTAATCTTGCCCATCGTCGGCTC 557777 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | |||||| |||||||||| | |||||| || |||||||| Sbjct 557776 CTTCAAGTGGATGTTGAGTGACTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCAT 557717 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GCGACGTACCTCAA 65315 | | | | |||| || |||||||| || |||||||| || || | | ||| Sbjct 557716 CTGCAGAACAGTACGTTGTGAGATCTCCCACACTGTCTTGTAAAGTGCCTTG-ATGTCAG 557658 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 || | | | | ||||| || || | ||||| ||||| || ||| Sbjct 557657 CCGGGACGTTTGGCACATTCTGGATAGAGCCGCCCTCAGCAATGATGCGGTTCTTCATGT 557598 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGAT-GTTGAACCAAGTGA-CGATTGATGACTTG 65433 ||||||||||| || | ||||| || | |||| | || | | || | || || Sbjct 557597 TGTCTGACCACAAGCCGAGATCGACCAGGTCCTTGAGC--AGCCAGGGGTTAACAACCTG 557540 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||||||||| | || || || || ||||||||||| ||| || || ||| | || Sbjct 557539 GAACTCGCCAGCAAGAACTCGGCGAGAGTAGATGTTGGATGTGTAAGGCTCGAAGCACTC 557480 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 | |||| || | || |||| || || || || ||||||||||| | || || |||||| Sbjct 557479 ATTGTTACCCAAGATCTGGGATGTTGAGGCTGTAGGCATGGGAGCCAGCAGCAGTGAGTT 557420 Query 65554 TCGCAATCCGT 65564 || | |||| Sbjct 557419 GCGAACACCGT 557409 >seq73 Length=165115 Score = 217 bits (240), Expect = 1e-51 Identities = 591/893 (66%), Gaps = 30/893 (3%) Strand=Plus/Plus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 || ||||| | |||||| || |||| | || || |||| |||||||| || || ||| Sbjct 157666 CGCTTCGTCCTCTTCCCCCTCAAGTACCATGAGATCTGGCAAATGTACAAGAAAGCAGAA 157725 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGT 61173 ||| ||||||||| | || || ||||| | ||| |||| | | ||||| | | Sbjct 157726 GCTAGCTTCTGGACCGCAGAAGAAGTCGACCTCTCCCAAGATCTACAACACTGGCACCAC 157785 Query 61174 ----TTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTC 61229 | | ||| || || | | |||||| ||| ||| | || ||||| ||||| || Sbjct 157786 CGCCTCAACGA-CGACGAGCGGTACTTCATTTCACACGTGCTCGCCTTCTTCGCCGCGTC 157844 Query 61230 GGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGA 61289 ||||| |||||||| ||||| | | || || ||| | ||||| || || | || Sbjct 157845 CGACGGCATCGTCAACGAGAACCTCCTCGAGCGCTTCTCCGGCGAGGTCCAGGTCCCCGA 157904 Query 61290 GGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAG 61349 |||||||| ||||||||||||||||| ||||| || ||||||| || |||||| Sbjct 157905 AGCGCGTTGCTTCTACGGCTTCCAGATCATGATGGAAAACATCCACTCCGAAATGTACTC 157964 Query 61350 TGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCAT 61409 | |||||||| ||||||||||| || | | |||| || | ||| | ||||| Sbjct 157965 GCTGCTCATCGACACGTACATCAGCGACCCCAAGCAACGATCACACCTCTTCGACGCCAT 158024 Query 61410 CGAGACGATACCGGCGGTGAAGCG---GAAAGCGGATTGGGCCTTCAATTGGATCACCAG 61466 ||| || || || | || | || ||| || || ||||| || ||||||| || Sbjct 158025 CGACACCATCCC--CTGT-ATCCGCAAGAAGGCCGACTGGGCACTCCGTTGGATCTCC-- 158079 Query 61467 TACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 |||| | || || | | || | | ||||| || | ||||| || | || Sbjct 158080 GACAAGCAATCGACCTTCGCGCAGCGCCTCGTCGCATTCGCCGCAGTCGAAGGCATCTTC 158139 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 ||| || || || || | ||||| ||| | |||||||| || || |||||||| || Sbjct 158140 TTCTCCGGCTCCTTCGCGTCCATCTTCTGGCTCAAGAAACGCGGTCTGATGCCCGGCCTC 158199 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG-CTG--TT 61641 |||||| ||| ||| | || || ||||||||||||||||| || || | ||| | Sbjct 158200 ACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCATGCACACCGACTTCGCCTGCCTA 158259 Query 61642 TTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGA--GCGTGTGGGTGAGATTG 61699 |||| | | | | | | | | || || || | || | | || | | Sbjct 158260 CTGCTCTCCCACCTCAA------GCACCGCCCCTCAAAAGAAGCCATCCAGGCCA---TC 158310 Query 61700 TTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTC 61758 |||| ||||| || | ||||| ||||| || || || ||||| | ||| | | ||| Sbjct 158311 ATCGTCGAGGCCGTCGCCATCGAGCAGGAGTTCCTCACAGACGCCCTCCCCTGCGCCCTC 158370 Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTG 61818 | |||||||| || ||| |||||| || || || || ||||| || ||| | Sbjct 158371 TTGGGCATGAACGCCAACCTGATGAAGCAGTACATCGAGTTCGTCGCCGATCGCCTGCTC 158430 Query 61819 GTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878 |||| | |||| | | || || | | ||||| ||||| |||||||| | Sbjct 158431 GTCGCTATGGGCAACCCCAAGTACTTCAAGTCTCAGAACCCCTTTGACTTCATGGAGAAC 158490 Query 61879 ATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || || || | ||||||||| || || |||||||| ||||| || ||||| || Sbjct 158491 ATCTCTCTCGCTGGCAAGACAAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 158543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567365257840