Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11 800 0.0 seq14 241 5e-61 >seq11 Length=796929 Score = 800 bits (886), Expect = 0.0 Identities = 589/681 (86%), Gaps = 5/681 (1%) Strand=Plus/Plus Query 6 GACCGGTGGCCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGC 64 ||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| Sbjct 774 GACCGGTGGTAGGGCCTGTGTAAAACTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGC 833 Query 65 TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACA 124 || ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 834 TCAAAATGGGTGGTAAATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACA 893 Query 125 AGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATT 184 ||||||||||||||||||||||||| |||||| ||||||||||||| || | |||||||| Sbjct 894 AGTAGAGTGATCGAAAGATGAAAAGAACTTTGAAAAGAGAGTTAAACAGTATGTGAAATT 953 Query 185 GTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCC 244 ||||||||||||||||||||||||||||||| ||| | || | ||| | ||| Sbjct 954 GTTGAAAGGGAAGCGCTTGCAACCAGACTTGAGCGCGACGGTTCCCCTAGCCTTTTGGCT 1013 Query 245 GGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGA 304 | |||| | | ||||||| |||| | || | |||||| ||||||||||||| Sbjct 1014 AGGTTACTCCGTCGTGTCCAGGCCAACATCGGTTCTGAGGGTCGGTCAAAGGCCCCGGGA 1073 Query 305 ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGG-TGGAATGCGGCCCGCCTGGACTGA 363 |||| | || |||| | |||||| |||||| || |||||||| | |||| || Sbjct 1074 ATGTACCTACCCACGGGTAGACTTATAGACCGGGGGTGTCATGCGGCCTCTCGGGACCGA 1133 Query 364 GGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 || |||||| ||||| ||||| ||||||||||||||| |||| ||||||||| |||||| Sbjct 1134 GGAACGCGCTTCGGCTCGGATGTTGGCGTAATGGTTGTCAGCGACCCGTCTTGAAACACG 1193 Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTG-CGCGTAATGAA 482 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 1194 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGGAACGCGGAATGAA 1253 Query 483 AGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGAT 542 ||||||||||||| |||| | | || ||||| ||||||||||||||| || | ||||| Sbjct 1254 AGTGAACGGAGGTAGGAAGC--TTCGGCTGCACTATCGACCGATCCTGAAGTTTACGGAT 1311 Query 543 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1312 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 1371 Query 603 GTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1372 GTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGT 1431 Query 663 CAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||| Sbjct 1432 CAAATTTGGGTATAGGGGCGA 1452 >seq14 Length=2335262 Score = 241 bits (266), Expect = 5e-61 Identities = 147/156 (94%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583 || ||||| || | ||||||||||| ||||||||||||||||||||| || ||||||||| Sbjct 2214526 GAACCTGAAGTTTACGGATGGATTTAAGTAAGAGCATAGCTGTTGGGGCCTGAAAGATGG 2214585 Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2214586 TGAACCATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 2214645 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 || ||||||||||||||||||||||||||||||||| Sbjct 2214646 TGACGTGCAAATCGATCGTCAAATTTGGGTATAGGG 2214681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999678250