Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoma_20herbarum_20[genbank_20GCA_5F001599375.1_202016-03-01] 218 sequences; 39,263,577 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq98 96.9 1e-17 seq11 82.4 2e-13 >seq98 Length=7802 Score = 96.9 bits (106), Expect = 1e-17 Identities = 120/159 (75%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 96 GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTC-TCCGGAATCGAACCCTAATT 154 ||||||||||||| | ||||| | |||||| | || || ||| | ||||||| | | Sbjct 665 GCCTTCCTTGGATACGCC-GCCGTGTTCCAGGCTGCTTCCTCTGGAGTTGAACCCTTACT 607 Query 155 CCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCA 214 || ||||||||| | |||||||| ||| || | |||||||||| || ||||||||| Sbjct 606 CCGA-TTACCCGTTCAACCCATGGTAAGCCGATACCTTACCATCGAAGGT-GATAGGGCA 549 Query 215 GAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGA 253 |||| ||||||||||| | || | ||| ||| |||| Sbjct 548 GAAACTTGAATGAACCGTTGCTAGGGCAAAGCCCAGCGA 510 >seq11 Length=1322403 Score = 82.4 bits (90), Expect = 2e-13 Identities = 101/133 (76%), Gaps = 5/133 (4%) Strand=Plus/Plus Query 138 GGAATCGAACCCTAATTCCCCGTT-ACCCGTTGATACCATGGTAGGCCACTATCCTACCA 196 ||| | ||||||| | ||| || |||||| || | |||||| ||| || | ||||| Sbjct 1316979 GGAGTTGAACCCTTACTCC--GTACACCCGTCGAAGCTATGGTAAGCCGATACCTTACCA 1317036 Query 197 TCGAA-AGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT 255 || || |||||||||||||| |||||||||| ||||| || |||||| |||||||| Sbjct 1317037 TCTTGCAGCTGATAGGGCAGAAACTTGAATGAACTATCGCTAGCGCAAGGCTATGCGATT 1317096 Query 256 CGTTAAGT-TATT 267 || ||| |||| Sbjct 1317097 TGTGCAGTGTATT 1317109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396707328