Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq52 852 0.0
seq868 329 1e-87
seq30 313 1e-82
seq382 140 1e-30
seq851 75.2 5e-11
>seq52
Length=563
Score = 852 bits (944), Expect = 0.0
Identities = 526/561 (94%), Gaps = 2/561 (0%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 561 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 502
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 501 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 442
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 441 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 382
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262
||||||||||| || || ||||||||| |||||| || |||||||| |||||||| || |
Sbjct 381 GCAACCAGACTCGCTCGTAGTTGCTCAGCCGGCCTCTTGGCCGGTGTACTCTTCTACGAT 322
Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322
| |||||||||||| |||||||| ||||||||| ||||||||| || ||||||||||
Sbjct 321 CGGGCCAGCATCAGTTCGGGCGGCAGGATAAAGGTGTCGGGAATGTAGCACCCTTCGGGG 262
Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGG 382
|||||||||||||| | ||||||| ||| ||||||||||||| | |||| |||| |||
Sbjct 261 TGTGTTATAGCCCGGCGCGGAATGCTGCCAGCCTGGACTGAGGATCTCGCTTCGGCAAGG 202
Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 201 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATC 142
Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 141 TATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 82
Query 503 CGTGA--GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 81 CCTCACGGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 22
Query 561 AGCTGTTGGGACCCGAAAGAT 581
|||||||||||||||||||||
Sbjct 21 AGCTGTTGGGACCCGAAAGAT 1
>seq868
Length=65722
Score = 329 bits (364), Expect = 1e-87
Identities = 203/216 (94%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA--GGGTGCACCATCGACCGATC 527
|||||||||||||||||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct 2443 TGCGCGTAATGAAAGTGAGCGGAGATGGGAACCCTGTACGGGGTGCACCATCGACCGATC 2384
Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2383 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 2324
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
| |||||| |||| |||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 2323 CAGTGCCTGGATAGTGTGAAGCCAGAGGAAACTCTCGTGGAGGCTCGCAGCGGTTCTGAC 2264
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||||||||||||||||||
Sbjct 2263 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 2228
>seq30
Length=417
Score = 313 bits (346), Expect = 1e-82
Identities = 175/176 (99%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 63
Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 123
Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 124 AGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 179
>seq382
Length=410
Score = 140 bits (154), Expect = 1e-30
Identities = 79/80 (99%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 18 AGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGG 77
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 80 AGCCATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGG 21
Query 78 TAAATTTCTTCTAAAGCTAA 97
||||||||||||||||||||
Sbjct 20 TAAATTTCTTCTAAAGCTAA 1
>seq851
Length=115926
Score = 75.2 bits (82), Expect = 5e-11
Identities = 46/49 (94%), Gaps = 0/49 (0%)
Strand=Plus/Plus
Query 29 GCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGG 77
||||||||||||| | ||||||||||||||||||||||| |||||||||
Sbjct 43731 GCTCCTTCGACGATTTGAGTTGTTTGGGAATGCAGCTCTGAATGGGAGG 43779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079971235550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |