Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq52 852 0.0 seq868 329 1e-87 seq30 313 1e-82 seq382 140 1e-30 seq851 75.2 5e-11 >seq52 Length=563 Score = 852 bits (944), Expect = 0.0 Identities = 526/561 (94%), Gaps = 2/561 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 561 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 502 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 501 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 442 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 441 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 382 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 ||||||||||| || || ||||||||| |||||| || |||||||| |||||||| || | Sbjct 381 GCAACCAGACTCGCTCGTAGTTGCTCAGCCGGCCTCTTGGCCGGTGTACTCTTCTACGAT 322 Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 | |||||||||||| |||||||| ||||||||| ||||||||| || |||||||||| Sbjct 321 CGGGCCAGCATCAGTTCGGGCGGCAGGATAAAGGTGTCGGGAATGTAGCACCCTTCGGGG 262 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGG 382 |||||||||||||| | ||||||| ||| ||||||||||||| | |||| |||| ||| Sbjct 261 TGTGTTATAGCCCGGCGCGGAATGCTGCCAGCCTGGACTGAGGATCTCGCTTCGGCAAGG 202 Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 201 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATC 142 Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 141 TATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 82 Query 503 CGTGA--GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 81 CCTCACGGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 22 Query 561 AGCTGTTGGGACCCGAAAGAT 581 ||||||||||||||||||||| Sbjct 21 AGCTGTTGGGACCCGAAAGAT 1 >seq868 Length=65722 Score = 329 bits (364), Expect = 1e-87 Identities = 203/216 (94%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA--GGGTGCACCATCGACCGATC 527 |||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||| Sbjct 2443 TGCGCGTAATGAAAGTGAGCGGAGATGGGAACCCTGTACGGGGTGCACCATCGACCGATC 2384 Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2383 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 2324 Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647 | |||||| |||| |||||||||||||||||||| |||||||||||||||||||||| | Sbjct 2323 CAGTGCCTGGATAGTGTGAAGCCAGAGGAAACTCTCGTGGAGGCTCGCAGCGGTTCTGAC 2264 Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||||||||||||||| Sbjct 2263 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 2228 >seq30 Length=417 Score = 313 bits (346), Expect = 1e-82 Identities = 175/176 (99%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 63 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 64 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 123 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 124 AGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 179 >seq382 Length=410 Score = 140 bits (154), Expect = 1e-30 Identities = 79/80 (99%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 18 AGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGG 77 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 80 AGCCATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGG 21 Query 78 TAAATTTCTTCTAAAGCTAA 97 |||||||||||||||||||| Sbjct 20 TAAATTTCTTCTAAAGCTAA 1 >seq851 Length=115926 Score = 75.2 bits (82), Expect = 5e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 29 GCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGG 77 ||||||||||||| | ||||||||||||||||||||||| ||||||||| Sbjct 43731 GCTCCTTCGACGATTTGAGTTGTTTGGGAATGCAGCTCTGAATGGGAGG 43779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079971235550