Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1157 77.0 5e-12 >seq1157 Length=6080 Score = 77.0 bits (84), Expect = 5e-12 Identities = 153/225 (68%), Gaps = 10/225 (4%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT-CGCAC 60 ||| |||| ||||| |||||| || || | ||||| | ||||| | |||| |||| Sbjct 2885 TTAGCCTTTCATCATTGGGCAGACGGCACACTCTATACTTAGACTTGTCATCTTACGCAA 2944 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | | |||||| | |||||||||| | | ||||| ||| || | | || | Sbjct 2945 AGTGTTTTGTTTTAATTAAACAGTCGTACAACACCATTCTATGCCTCCTCTTATAACTTA 3004 Query 121 ACACGTCGTTCACCAG---CAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || | ||| || ||| | |||||||||| |||||||| | || |||||| Sbjct 3005 TA------TTAATCAGTTACAATGGTTCTCCTTCTCCCGCAGTTACGGAGTCAATTTGCC 3058 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTAC 222 || |||||||| | ||| | | |||||||| ||||||||||| Sbjct 3059 GAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 3103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694390979093