Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1157 84.2 6e-14 >seq1157 Length=6080 Score = 84.2 bits (92), Expect = 6e-14 Identities = 136/192 (71%), Gaps = 9/192 (5%) Strand=Plus/Plus Query 96 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGG 155 ||| | | ||||| ||| ||||||||||||||| | || | || ||||||| || | ||| Sbjct 2779 TTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTCATAGGTAAGGCCGCCATTAAACGG 2838 Query 156 GGCTTCGATCAA----GAGCTT---CGCGTTAGCTAACCCCATCAATTAACCTTCCGGCA 208 || ||| |||| ||||| || |||||| ||| ||| |||| | || Sbjct 2839 GGGTTCCTTCAAAATCTAGCTTATATTAGTCAGCTAAATAAATCCGTTAGCCTTTCATCA 2898 Query 209 CCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTGTT-TGCAGAGTGCTGTGTTTTT 266 |||||| || ||||| |||||| | |||| || | || ||| |||| | |||||| Sbjct 2899 TTGGGCAGACGGCACACTCTATACTTAGACTTGTCATCTTACGCAAAGTGTTTTGTTTTA 2958 Query 267 AATAAACAGTCG 278 | |||||||||| Sbjct 2959 ATTAAACAGTCG 2970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260783092672