Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq651 365 7e-99 seq288 78.8 1e-12 >seq651 Length=383 Score = 365 bits (404), Expect = 7e-99 Identities = 236/257 (92%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 382 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGA 323 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 322 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 264 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| ||| || | |||||||||||||||||||||||||||||||||||| |||||| Sbjct 263 ACCCGCCAAAGCGGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 204 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 203 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAA 144 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 143 AGAGCTCTCAATCTGTC 127 >seq288 Length=27017 Score = 78.8 bits (86), Expect = 1e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 5 CGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCA 57 || |||||| |||||||||||||||||||||||||| |||||||||| ||||| Sbjct 15297 CGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGACATCA 15245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796789648821