Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016-
03-31] 1,341 sequences; 32,454,403 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq617 284 2e-74
seq72 174 3e-41
seq647 109 9e-22
seq653 86.0 1e-14
>seq617
Length=1412
Score = 284 bits (314), Expect = 2e-74
Identities = 186/201 (93%), Gaps = 3/201 (1%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 201 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 144
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 143 GCCGCGAAGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 84
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
|||||||||||||||| ||||||||||||||||||||||||||||| | | ||||| |||
Sbjct 83 GAACGGGGTGATTCTCCCCTGCACATCGTAGTCGGATACGAATAGGCCCTTGGCCCAGAA 24
Query 180 CCTTAGCAGGCCGGCAACGGG 200
| |||||||||||| |||||
Sbjct 23 TCCTAGCAGGCCGGCGACGGG 3
>seq72
Length=823
Score = 174 bits (192), Expect = 3e-41
Identities = 132/153 (86%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 127 GGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCT-TCGGCCCCGAACCTTAG 185
|||||||||| |||||||||||||||||||||||||||||| | ||||| ||| | |||
Sbjct 1 GGTGATTCTCCCCTGCACATCGTAGTCGGATACGAATAGGCCCTTGGCCCAGAATCCTAG 60
Query 186 CAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTC 245
||||||||| ||||| | ||| ||| ||| | | |||||||||||||||||||||
Sbjct 61 CAGGCCGGCGACGGGGGCTCCGTTGAAATCGGGGTCTC-CAGCTGGCGGATTGCAATTTC 119
Query 246 ACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||||||||||||||||||||||||||
Sbjct 120 ACAATGCGCAGGGATAAATCCTTTGCAGACGAC 152
>seq647
Length=34029
Score = 109 bits (120), Expect = 9e-22
Identities = 68/73 (93%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 39 TGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98
|||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 12633 TGCGGCTGTCCGACCGGGCAGTGCCGCGAAGCTACCATCTGCCGGAGTATGGCTGAACGC 12692
Query 99 CTCTAAGTCAGAA 111
||| |||||||||
Sbjct 12693 CTCCAAGTCAGAA 12705
>seq653
Length=73094
Score = 86.0 bits (94), Expect = 1e-14
Identities = 60/67 (90%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79
||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 44048 ATTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGCCCAGTGCCGCGAAGCTACCATCTG 44106
Query 80 CTGGATT 86
| || ||
Sbjct 44107 CCGGCTT 44113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819189357824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |