Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq617 284 2e-74 seq72 174 3e-41 seq647 109 9e-22 seq653 86.0 1e-14 >seq617 Length=1412 Score = 284 bits (314), Expect = 2e-74 Identities = 186/201 (93%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 201 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 144 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 143 GCCGCGAAGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 84 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 |||||||||||||||| ||||||||||||||||||||||||||||| | | ||||| ||| Sbjct 83 GAACGGGGTGATTCTCCCCTGCACATCGTAGTCGGATACGAATAGGCCCTTGGCCCAGAA 24 Query 180 CCTTAGCAGGCCGGCAACGGG 200 | |||||||||||| ||||| Sbjct 23 TCCTAGCAGGCCGGCGACGGG 3 >seq72 Length=823 Score = 174 bits (192), Expect = 3e-41 Identities = 132/153 (86%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 127 GGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCT-TCGGCCCCGAACCTTAG 185 |||||||||| |||||||||||||||||||||||||||||| | ||||| ||| | ||| Sbjct 1 GGTGATTCTCCCCTGCACATCGTAGTCGGATACGAATAGGCCCTTGGCCCAGAATCCTAG 60 Query 186 CAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTC 245 ||||||||| ||||| | ||| ||| ||| | | ||||||||||||||||||||| Sbjct 61 CAGGCCGGCGACGGGGGCTCCGTTGAAATCGGGGTCTC-CAGCTGGCGGATTGCAATTTC 119 Query 246 ACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||||||||||||||||||||||||||||| Sbjct 120 ACAATGCGCAGGGATAAATCCTTTGCAGACGAC 152 >seq647 Length=34029 Score = 109 bits (120), Expect = 9e-22 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 39 TGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98 |||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 12633 TGCGGCTGTCCGACCGGGCAGTGCCGCGAAGCTACCATCTGCCGGAGTATGGCTGAACGC 12692 Query 99 CTCTAAGTCAGAA 111 ||| ||||||||| Sbjct 12693 CTCCAAGTCAGAA 12705 >seq653 Length=73094 Score = 86.0 bits (94), Expect = 1e-14 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79 ||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 44048 ATTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGCCCAGTGCCGCGAAGCTACCATCTG 44106 Query 80 CTGGATT 86 | || || Sbjct 44107 CCGGCTT 44113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819189357824