Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1070 693 0.0 seq60 302 1e-79 >seq1070 Length=1242 Score = 693 bits (768), Expect = 0.0 Identities = 396/404 (98%), Gaps = 0/404 (0%) Strand=Plus/Minus Query 101 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1242 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGT 1183 Query 161 TACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1182 TACCCGTTGCTACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 1123 Query 221 TGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG 280 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 1122 TGAATGAACCATCGCCGGCGCAAGGCCATGCGATTCGTTAAGTTATCATGAATCACCAAG 1063 Query 281 GAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTT 340 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1062 GAGCCCCGAAGGGCATTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTT 1003 Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATA 400 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1002 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATA 943 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 942 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATAGATTGCTTATACTTAGA 883 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 882 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 839 >seq60 Length=723 Score = 302 bits (334), Expect = 1e-79 Identities = 173/177 (98%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 177 GTACTCATTCCAATTACAAGACTCGAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 118 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 58 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 57 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGCTACCATG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510379745536