Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq546 379 2e-100 seq496 174 1e-38 >seq546 Length=57559 Score = 379 bits (420), Expect = 2e-100 Identities = 1213/1854 (65%), Gaps = 57/1854 (3%) Strand=Plus/Plus Query 65105 GCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAA 65164 ||||||| || | || ||||||||||| |||||||| ||| ||| | || Sbjct 42354 GCCGCCTGCGTACGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCAAAG 42413 Query 65165 TGCATCGATGATAATTTTGCATA-ATTCGGCTCGGCCACATGCATATTCAACGACTGACT 65223 ||||| || | | || |||| | | | ||||| || || || |||| |||||| Sbjct 42414 TGCATGGAGG-TGATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTCAGCGACTGGGA 42472 Query 65224 CTGATCGATGTAACGACCACGATCTGCAGCCATGT---CAATGATACGACGTCCCGATAT 65280 ||| |||||| || || || || |||||||| | ||||| | || | ||| || Sbjct 42473 CTGGTCGATGAAAGCGCCGCGGTCAGCAGCCATCTGCACAATGGTGCGCTG---CGAAAT 42529 Query 65281 CTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGA 65339 |||||||||||||||||| || | | | | ||| ||||| | ||| ||||||| Sbjct 42530 CTCCCAGACGGTCTTGTAGAGA-GCCTTGATGTCATCGGGAATGTTGGGAATATCCTGGA 42588 Query 65340 CTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGA 65399 || ||| | ||||| || || || ||| ||||||||||| |||| |||| Sbjct 42589 TAGAGCCATTGCAGGCAATGATACGGTTCTTCATGTTGTCTGACCACAAGCCCATCTCGA 42648 Query 65400 TAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGACG 65457 || | |||| ||| | | |||| ||| |||||||| |||| || ||||| || Sbjct 42649 CGAGGTCCTTGAG--AAGCCAGGGGTTGACGACCTGGAACTCACCGGCGAGGACACGGCG 42706 Query 65458 GACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGT 65517 ||||||||||| ||| || || || |||| || ||| ||||| ||| || Sbjct 42707 CGAGTAGATGTTGGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCGAGAATCTGGCTGGT 42766 Query 65518 AGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTT 65577 || ||||| ||||| || || || | ||| ||| |||| |||| | |||| | Sbjct 42767 CGAGGCAGTCGGCATAGGGGCAACGAGCAAGCTGTTCCGCACACCGTGCTGAGCAATCTC 42826 Query 65578 GTGACGCAATTCG-TCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATAT 65636 |||| | | ||||||| ||| | | | ||| | || | |||||| | Sbjct 42827 -TGACTTCAGGCTCTCCCAGTCCCATA---GATC--CGTAGGGGTCTT-GTTCCACATGT 42879 Query 65637 CCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCT 65696 | | |||| | | || | | | || || || | || | ||||| | || | || Sbjct 42880 CGTACTGCAAGATACCTTGAGAGACAGGCGATCCCTCGTAAGTCTCGTAGGCACCGTTCT 42939 Query 65697 CCTTGGCAAGTT-GACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGT 65755 |||||| || | ||| | | | ||| ||| | || ||||| ||||| || || Sbjct 42940 TCTTGGCCAGCTCGACGGAAGCCGT-GAGAGCG-CGTGGTAGATGGTTTCGAAGATCTGT 42997 Query 65756 CGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCG 65815 || |||| | ||||| ||| | ||||| | | || || | || Sbjct 42998 ATGTTGAGTTGCCTGGCCTCGGGCGAGTCGAAAGGCATGCGAAGAGCGAGGAATGCATCA 43057 Query 65816 GCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCA 65875 || || || | || || | | | ||||| ||||| |||| ||| ||| ||||| Sbjct 43058 GCAAGGCCGTTGACACCGACAGCAATGGGGCGATGGCGCATGTTGCTCTTTCTGGCCTCG 43117 Query 65876 GGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTC-ACCACATGCAC 65934 || |||||||||| ||||| ||||| || ||||| || | || | | || || || Sbjct 43118 GGAACAGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTT-CTTGACGAGGACTTGGAC 43176 Query 65935 GATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCA- 65993 | | ||| | | ||| ||| | |||| | || | ||||| || Sbjct 43177 AACATTGTGCAGCTTCTTGAAGTCATA--------GACGTT-----GTTCTGGACATCAA 43223 Query 65994 CAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTAT 66053 |||| | ||||| || ||||| || | ||||| ||||| | ||| |||||||| || | Sbjct 43224 CAAAGGTAGGAAGAGCGAGAGAGGCCAAATTGCAAACAGCAACCTCATCAGGAGCCGTGT 43283 Query 66054 ACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTAC 66113 |||| ||||| ||| ||| || || || ||| |||||||| | |||| || || | Sbjct 43284 ACTCAACAATCTCGCAGCAGAGGTTGGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGC 43343 Query 66114 TCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACT 66173 ||||||| ||||| ||||||||||| | ||| | ||| |||||||||| || | || Sbjct 43344 TCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGATTGCCGGTCTCGGTCTGAGCCT 43403 Query 66174 CAATGATGGCGTGCCAAAGA------GCGCGTGCCTTCACCGTACGTACCGCCCTACCTT 66227 | | |||||| | ||| || ||||| | || | || || ||| | |||| Sbjct 43404 CGAGGATGGCATACCACAGCTTTTGGGCGCGGACTGTCTCGCGACC-ACGGCCTTCCCTT 43462 Query 66228 TGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATG 66287 | |||| |||||||| | ||||| || || | || |||| |||| | Sbjct 43463 T-----CGTACCTCTCGTAGAGCTCCTCGAACTCGTCGCCGTACACGTCGGCAAGACCCG 43517 Query 66288 GACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATA 66347 | || ||| || || | || | ||| ||||| | || || ||||| ||| || | Sbjct 43518 GGGCCTCGTGAGGGCAAAAGAGAGTCCATTCACCGTTTTGCTCCACACGCTTCATGAACA 43577 Query 66348 GATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGAT 66407 |||| || ||||| | ||||| ||||| ||||| || || |||||| | ||||| | Sbjct 43578 GATCGGGAATCCACAACGCGTAAAAGAGGTCGCGCGCGCGGACCTCCTCCTTTCCGTGGT 43637 Query 66408 TTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGA 66467 | ||||| | ||||||||| |||| ||| || ||||| || |||||||||||||| | Sbjct 43638 TCTTGCGAAGGTCGAGGAAGGGGAAGACGTCAGCGTGCCAAGGCTCCAGGTAGATGGCAA 43697 Query 66468 ACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACAC 66527 | | || ||| ||| |||||||||||||||||||||||| |||||| |||| | Sbjct 43698 AAGCACCAGGACGCTTGTTGCCACCTTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACTC 43757 Query 66528 GCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTG 66587 | | ||| || | || ||||| || | || |||||||| | ||| ||| ||| | Sbjct 43758 GGAGCATGGGAATCAGGCCGTTGGAGGTACCGTTGGTGCCAGCAATGTAGGAGCCTGTGG 43817 Query 66588 CCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA- 66646 || ||| ||| || || |||||||| |||||||||||||| || || ||||||| Sbjct 43818 AACGAATACGGTGGACGTTGAGACCAATTCCACCGGCCGTCTTGGAAATCATAGCACAAG 43877 Query 66647 TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705 || | | |||| | | || || || ||| ||| |||| ||| | | | |||| Sbjct 43878 TCTTGAGAGTGTC--GTAAATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCA 43935 Query 66706 TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 ||| ||| ||||| ||||| || | || ||| | |||||| | || || ||||| Sbjct 43936 TGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGGGAGGCATGAGTAAA 43995 Query 66766 GTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAAT 66825 | | | ||||| | |||||||| |||| | || |||| |||||| || || Sbjct 43996 GCACTTTTCCGACATCAACTTGTACGTTTCGAGGGCACTCGTTATGTCTTCGCCGTGGAT 44055 Query 66826 CCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATG 66885 |||| ||| ||||| | | || || || | |||| | | | ||||| | Sbjct 44056 ACCGACAGCAACACGCATGATCATGTGCTGCGGTCTTTCGGCAACTTTGCCATTGATGCG 44115 Query 66886 CATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | ||||| || | ||||| ||||||| |||||| || ||| ||||| || Sbjct 44116 AAGCAAGTATGACCTCTCCAGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTC 44169 >seq496 Length=30664 Score = 174 bits (192), Expect = 1e-38 Identities = 301/435 (69%), Gaps = 3/435 (1%) Strand=Plus/Plus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | ||||||||| | || ||||| || || || || | ||||| ||| | Sbjct 5398 GCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTTCCTTCGCGTCCATCTTCTGGCTC 5457 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| || || |||||| ||| ||| | || || || |||||| Sbjct 5458 AAGAAGCGTGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 5517 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 |||||||| || ||||| |||| ||| | | ||| || | || ||| Sbjct 5518 GGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCAC-ATCAAGTCCAAG--CCTTCG 5574 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 ||| ||||| ||| | ||||| || || || || || || || || Sbjct 5575 CCCGAGACTGTGGAGAGGATCATCACCGAGGCCGTCGAGATGGAGCAAGAGTTCCTTACC 5634 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 |||||| | |||||| | || |||||||||| | || |||| ||||| || || Sbjct 5635 GACGCTCTTCCCGTCGCCCTGCTCGGCATGAACGCTACCCTCATGTGCCAGTACATCGAG 5694 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 |||||||||||||| ||| |||| | | | || | ||| | |||| || ||| ||| Sbjct 5695 TTTGTTGCCGACCGCCTGCTGGTGGCTCTTGGCAACAAGAAGTTCTACAACTCGACCAAC 5754 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||| | |||||||| | |||||||| || || |||||||| ||| Sbjct 5755 CCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGT 5814 Query 61918 GTAGGCGACTATCAA 61932 || || ||||| ||| Sbjct 5815 GTTGGTGACTACCAA 5829 Score = 125 bits (138), Expect = 6e-24 Identities = 210/299 (70%), Gaps = 11/299 (4%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| || Sbjct 4937 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCTGAGGAGATTGATCTG 4996 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| ||| | |||||||| | |||| | || | ||| | | |||| | | Sbjct 4997 TCCAAGGACCTTCATGACTGGAACAAGCGTCT---GAATGATGACGAGCGTTTCTTCATC 5053 Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || || | || ||||| || || |||||||| || ||||| ||||| || | || Sbjct 5054 TCTCACGTCCTTGCCTTCTTCGCTGCATCGGACGGCATTGTCAACGAGAACTTGGTCGAG 5113 Query 61261 CGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 || ||| || | | |||| || | | ||||| || || |||||||||||||||||| Sbjct 5114 CGCTTCAGCTCCG-AGGTTCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATTAT 5172 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 |||||||| | ||||| |||| ||| | | ||||| |||||||| || |||| Sbjct 5173 GATGGAGAACATTCACTCCGAGACTTACTCGCTCTTGATCGACACGTACATTAGCGAGC 5231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397561502372240