Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2108 271 1e-70 seq348 87.8 3e-15 >seq2108 Length=21187 Score = 271 bits (300), Expect = 1e-70 Identities = 200/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| | Sbjct 20662 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 20719 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 20720 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 20779 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||| |||||||||| |||||||| | ||||||||||||||||||| Sbjct 20780 ACCCAGGCCTATCGGTCAAGGTGATAAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 20839 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 20840 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 20888 >seq348 Length=597 Score = 87.8 bits (96), Expect = 3e-15 Identities = 66/75 (88%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| || ||||||| |||||||||||| | ||| Sbjct 523 GTACAAAGGGCAGGGACGTAATCAACGCATGC-TGATGACATGCGCTTACTAGGCA-TTC 580 Query 61 CTCGTTGAAGACCAA 75 ||||||||||| ||| Sbjct 581 CTCGTTGAAGAGCAA 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751958125820