Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2376 1045 0.0 >seq2376 Length=6198 Score = 1045 bits (1158), Expect = 0.0 Identities = 643/684 (94%), Gaps = 1/684 (0%) Strand=Plus/Minus Query 1 TACGTGACCGGTGGCCT-AGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 || ||| | || ||||| |||| |||||| |||||||||||||||||||||||||||||| Sbjct 5964 TATGTGGCGGGCGGCCTTAGCCATGTGAAACTCCTTCGACGAGTCGAGTTGTTTGGGAAT 5905 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 5904 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGC 5845 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 5844 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGTACGTG 5785 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239 |||||||||||||||||||||||||||||||||| | |||||||||||| || ||| || Sbjct 5784 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTCGTTCGCAGTTGCTCAGCCCGCCTCT 5725 Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299 || |||| |||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 5724 TGGTGGGTGTACTCTTCTGCGGTCGGGCCAGCATCAGTTCGGGCGGTCGGATAAAGGTGT 5665 Query 300 CGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGA 359 ||||||||| || |||||||||| |||||||||||||| | ||||||||||| ||||||| Sbjct 5664 CGGGAATGTAGCACCCTTCGGGGTGTGTTATAGCCCGGCGCGGAATGCGGCCAGCCTGGA 5605 Query 360 CTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAA 419 |||||| | |||| |||| ||||||||||||||||||||||||||||||||||||| || Sbjct 5604 CTGAGGATCTCGCTTCGGCAAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGAAA 5545 Query 420 CACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAAT 479 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 5544 CACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTAAT 5485 Query 480 GAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCG 539 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 5484 GAAAGTGAACGGAGGTGGGAACCCGCAAGGGTGCACCATCGACCGATCCTGATGTCTTCG 5425 Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5424 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 5365 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 5364 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGAT 5305 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||| Sbjct 5304 CGTCAAATTTGGGTATAGGGGCGA 5281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079876705400